LOCUS BC003684 2537 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coxsackie virus and adenovirus receptor, mRNA (cDNA
clone MGC:5086 IMAGE:3463613), complete cds.
ACCESSION BC003684
VERSION BC003684.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2537)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2537)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45827793.
FEATURES Location/Qualifiers
source 1..2537
/db_xref="H-InvDB:HIT000031695"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5086 IMAGE:3463613"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2537
/gene="CXADR"
/gene_synonym="CAR"
/gene_synonym="HCAR"
/db_xref="GeneID:1525"
/db_xref="HGNC:HGNC:2559"
/db_xref="MIM:602621"
CDS 102..1199
/gene="CXADR"
/gene_synonym="CAR"
/gene_synonym="HCAR"
/codon_start=1
/product="coxsackie virus and adenovirus receptor"
/protein_id="AAH03684.1"
/db_xref="GeneID:1525"
/db_xref="HGNC:HGNC:2559"
/db_xref="MIM:602621"
/translation="MALLLCFVLLCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFT
LSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGD
ASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKI
KCEPKEGSLPLQYEWQKLSDSQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRV
GSDQCLLRLNVVPPSNKAGLIAGAIIGTLLALALIGLIIFCCRKKRREEKYEKEVHHD
IREDVPPPKSRTSTARSYIGSNHSSLGSMSPSNMEGYSKTQYNQVPSEDFERTPQSPT
LPPAKVAAPNLSRMGAIPVMIPAQSKDGSIV"
BASE COUNT 809 a 458 c 509 g 761 t
ORIGIN
1 cgccgccgcg agccagtcgg gagcgcgcga ggcgcgggga gcctgggacc aggagcgaga
61 gccgcctacc tgcagccgcc gcccacggca cggcagccac catggcgctc ctgctgtgct
121 tcgtgctcct gtgcggagta gtggatttcg ccagaagttt gagtatcact actcctgaag
181 agatgattga aaaagccaaa ggggaaactg cctatctgcc gtgcaaattt acgcttagtc
241 ccgaagacca gggaccgctg gacatcgagt ggctgatatc accagctgat aatcagaagg
301 tggatcaagt gattatttta tattctggag acaaaattta tgatgactac tatccagatc
361 tgaaaggccg agtacatttt acgagtaatg atctcaaatc tggtgatgca tcaataaatg
421 taacgaattt acaactgtca gatattggca catatcagtg caaagtgaaa aaagctcctg
481 gtgttgcaaa taagaagatt catctggtag ttcttgttaa gccttcaggt gcgagatgtt
541 acgttgatgg atctgaagaa attggaagtg actttaagat aaaatgtgaa ccaaaagaag
601 gttcacttcc attacagtat gagtggcaaa aattgtctga ctcacagaaa atgcccactt
661 catggttagc agaaatgact tcatctgtta tatctgtaaa aaatgcctct tctgagtact
721 ctgggacata cagctgtaca gtcagaaaca gagtgggctc tgatcagtgc ctgttgcgtc
781 taaacgttgt ccctccttca aataaagctg gactaattgc aggagccatt ataggaactt
841 tgcttgctct agcgctcatt ggtcttatca tcttttgctg tcgtaaaaag cgcagagaag
901 aaaaatatga aaaggaagtt catcacgata tcagggaaga tgtgccacct ccaaagagcc
961 gtacgtccac tgccagaagc tacatcggca gtaatcattc atccctgggg tccatgtctc
1021 cttccaacat ggaaggatat tccaagactc agtataacca agtaccaagt gaagactttg
1081 aacgcactcc tcagagtccg actctcccac ctgctaaggt agctgcccct aatctaagtc
1141 gaatgggtgc gattcctgtg atgattccag cacagagcaa ggatgggtct atagtataga
1201 gcctccatat gtctcatctg tgctctccgt gttcctttcc tttttttgat atatgaaaac
1261 ctattctggt ctaaattgtg ttactagcct caaaatacat caaaaaataa gttaatcagg
1321 aactgtacgg aatatatttt taaaaatttt tgtttggtta tatcgaaata gttacaggca
1381 ctaaagttag taaagaaaag tttaccatct gaaaaagctg gattttcttt aagaggttga
1441 ttataaagtt ttctaaattt atcagtacct aagtaagatg tagcgctttg aatatgaaat
1501 cataggtgaa gacatgggtg aacttacttg cataccaagt tgatacttga ataaccatct
1561 gaaagtggta cttgatcatt tttaccatta tttttaggat gtgtatttca tttatttatg
1621 gcccaccagt ctcccccaaa ttagtacaga aatatccatg acaaaattac ttacgtatgt
1681 ttgtacttgg ttttacagct cctttgaaaa ctctgtgttt ggaatatctc taaaaacata
1741 gaaaacacta cagtggttta gaaattacta attttacttc taagtcattc ataaaccttg
1801 tctatgaaat gacttcttaa atatttagtt gatagactgc tacaggtaat agggacttag
1861 caagctcttt tatatgctaa aggagcatct atcagattaa gttagaacat ttgctgtcag
1921 ccacatattg agatgacact aggtgcaata gcagggatag attttgttgg tgagtagtct
1981 catgccttga gatctgtggt ggtcttcaaa atggtggcca gccagatcaa ggatgtagta
2041 tctcatagtt cccaggtgat atttttctta ttagaaaaat attataactc atttgttgtt
2101 tgacacttat agattgaaat ttcctaattt attctaaatt ttaagtggtt ctttggttcc
2161 agtgctttat gttgttgttg tttttggatg gtgttacata ttatatgttc tagaaacatg
2221 taatcctaaa tttaccctct tgaatataat ccctggatga tattttttat cataaatgca
2281 gaataatcaa atacatttta agcaagttaa gtgtcctcca tcaattctgt attccagact
2341 tgggaggatg tacagttgct gttgtgtgat caaacatgtc tctgtgtagt tccagcaaat
2401 caagctgagc tttgaaaaag tttgtcttag ttttgtgaag gtgatttatt cttaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaa
//