LOCUS BC003625 1842 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens immediate early response 2, mRNA (cDNA clone MGC:2309
IMAGE:2966293), complete cds.
ACCESSION BC003625
VERSION BC003625.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1842)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1842)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC003625.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: c Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48675810.
FEATURES Location/Qualifiers
source 1..1842
/db_xref="H-InvDB:HIT000031653"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2309 IMAGE:2966293"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1842
/gene="IER2"
/gene_synonym="ETR101"
/db_xref="GeneID:9592"
/db_xref="HGNC:HGNC:28871"
CDS 109..780
/gene="IER2"
/gene_synonym="ETR101"
/codon_start=1
/product="immediate early response 2"
/protein_id="AAH03625.1"
/db_xref="GeneID:9592"
/db_xref="HGNC:HGNC:28871"
/translation="MEVQKEAQRIMTLSVWKMYHSRMQRGGLRLHRSLQLSLVMRSAR
ELYLSAKVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAP
TAEETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRL
QPPPAQAEGAFPNLARVLQRRFSGLLNCSPAAPPTAPPACEAKPACRPADSMLNVLVR
AVVAF"
BASE COUNT 321 a 553 c 603 g 365 t
ORIGIN
1 gtgggttggt ttgtgtagag aggcgtgagc gagcccgttg tccggagtgc acctgctgcc
61 tgttctgtcc ctcccgggag cccccgccgc tgtcgccgtc gagtcgccat ggaagtgcag
121 aaagaggcac agcgcatcat gaccctgtcg gtgtggaaga tgtatcactc ccgcatgcag
181 cgcggtggcc tgcggctgca ccggagtctg cagctgtcgc tggtcatgcg cagcgcccgg
241 gagctctacc tctcggccaa ggtggaggcc ctcgagcccg aggtgtcgtt gccggccgcc
301 ctcccctctg accctcgcct gcacccgccc cgagaagccg agtccacggc cgagacagcg
361 acccccgacg gtgagcaccc gtttccggag ccaatggaca cgcaggaggc gccgacagcc
421 gaggagacct ccgcctgctg tgccccgcgc cccgccaaag tcagccgcaa acgacgcagc
481 agcagcctga gcgacggcgg ggacgctgga ctggtcccga gcaagaaagc ccgtctggaa
541 gaaaaggaag aagaggaggg agcgtcatcc gaagtcgccg atcgcctgca gccccctccg
601 gcgcaagcgg agggcgcctt tcccaacctg gcccgcgtcc tgcagaggcg cttctccggc
661 ctcctgaact gcagccccgc ggcccctccg acggcgccgc ccgcgtgcga ggcaaagccc
721 gcttgccgcc cggcggacag catgctcaac gtgctcgtgc gggccgtggt ggccttctga
781 ggaccccgag cggcgctgcc ggagcccaga gcgcgcgtcg aaccgtcggc ccgagggcgc
841 agacctgagg cgaggccacc cccctccatc ctgggggaag cgcccgcgaa aaccgtggag
901 agaagccgcc gcccgggctg ctgagaggcc cggagaggga ctctgtcccc ggggagccat
961 cgccttcagt gtgcagggac ggcaccgagg cgtctgagcc gggggcgcgg gcgccttccg
1021 cagagacctg cgcccacagg tgctgtctta gtggactggg acgtgaacct ttcgctctcc
1081 ttctggactg ggagaaggga ggcttgggtg ttgtgttttt tgttttgttt gtttgtttgt
1141 ttttaaagat ctcctcaggg tcggacttca ttttgtactg tgggctgtgc tggccctttc
1201 aaggtttttc aagagttggt tttgcgtttc caacctcgga gaattccagg cactcccctt
1261 ccccctccgc tgacatactt gtataagcgg tcatcgttgc gtcatggggc aggcgtgggg
1321 agcttcctgt cgccttgcgt gggtgtgggg cctgggagga ggtcctgggg cgtgcacccg
1381 ccctgggcag tggggaggag agtggcctga gttacttcac ccccgcgtgc tgctggttaa
1441 tgtcccgcgt ctctgcacct tcgggtggga gcggggactg atctactttc acattctcaa
1501 gtttttctca tctgcattag aggtgcccag taggttccca ggttccagcg tgcccctccc
1561 tcagacacac ggacacaatc agccgagaag ttcctggtct gaatcacgag aatgtggagg
1621 ggtggggggt gtcagtggaa aggcataagg ctgagctgag accagttgct ggtgaaactg
1681 ggccaatctg gggaggggaa catccttgcc agggagtttc tgagggtctg ctttgtttac
1741 ctttcgtgcg gtggattctt tttaactccg tctacctggc gttttgttag aaatgtcaga
1801 taggaaaata aaaaccattt gagtaaaaaa aaaaaaaaaa aa
//