LOCUS BC003617 3070 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB6A, member RAS oncogene family, mRNA (cDNA clone
MGC:1654 IMAGE:3506585), complete cds.
ACCESSION BC003617
VERSION BC003617.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3070)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3070)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC003617.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38679893.
FEATURES Location/Qualifiers
source 1..3070
/db_xref="H-InvDB:HIT000031646"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1654 IMAGE:3506585"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3070
/gene="RAB6A"
/gene_synonym="RAB6A'"
/gene_synonym="RAB6B"
/db_xref="GeneID:5870"
/db_xref="HGNC:HGNC:9786"
/db_xref="MIM:179513"
CDS 418..1044
/gene="RAB6A"
/gene_synonym="RAB6A'"
/gene_synonym="RAB6B"
/codon_start=1
/product="RAB6A, member RAS oncogene family"
/protein_id="AAH03617.1"
/db_xref="GeneID:5870"
/db_xref="HGNC:HGNC:9786"
/db_xref="MIM:179513"
/translation="MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQA
TIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQ
QTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAG
YNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSEGGCSC"
BASE COUNT 899 a 637 c 631 g 903 t
ORIGIN
1 ggcggcggca gctgtggaag ctcaggcgct gcgcgtgaga ggtcccagat acgtctgcgg
61 ttccggctcc gccaccctca gcttctcttc cccaggtctg ggagccgagt gcggaaggag
121 ggaacggccc tagctttggg aagccagagg acacccctgg ctcctgccga caccgccctc
181 cttcccttcc cagccgcggg cctcgctcgg tgctaggcta ctctgccggg aggcggcggc
241 ggctgccagt ctgtggagag tcctgctgcc ctccagccgg gctcctccac cgggccttgc
301 aggggccgag agagctcggt gcccgccctt ccgctcgcct ttttcgtcag ctggctggag
361 cagcatcggt ccgggaggtc tctaggctga ggcggcggcc gctcctctag ttccacaatg
421 tccacgggcg gagacttcgg gaatccgctg aggaaattca agctggtgtt cctgggggag
481 caaagcgttg gaaagacatc tttgatcacc agattcatgt atgacagttt tgacaacacc
541 tatcaggcaa caattggcat tgacttttta tcaaaaacta tgtacttgga ggatcgaaca
601 atcaggcttc agctgtggga tactgcgggt caggaacgtt tccgtagcct cattcccagt
661 tacatccgtg attctgctgc agctgtagta gtttacgata tcacaaatgt taactcattc
721 cagcaaacta caaagtggat tgatgatgtc agaacagaaa gaggaagtga tgttatcatc
781 atgctagtag gaaataaaac agatcttgct gacaagaggc aagtgtcaat tgaggaggga
841 gagaggaaag ccaaagagct gaatgttatg tttattgaaa ctagtgcaaa agctggatac
901 aatgtaaagc agctctttcg acgtgtagca gcagctttgc cgggaatgga aagcacacag
961 gacagaagca gagaagatat gattgacata aaactggaaa agcctcagga gcaaccagtc
1021 agtgaaggag gctgttcctg ctaatctccc atgtcatctt caaccttctt cagaagctca
1081 ctgctttggc ccccttactc tttcattgac tgcagtgtga atattggctt gaaccttttc
1141 ccttcagtaa taacgtattg caattcatca ttgctgcctg tctcgtggag atgatctatt
1201 agcttcacaa gcacaacaaa agtcagtgtc ttcattattt atattttaca aaaagccaaa
1261 atatttcagc atattccagt gataacttta aaaattagat acattttctt aacatttttt
1321 tcttttttaa tgttatgata atgtacttca aaatgatgga aatctcaaca gtatgagtat
1381 ggcttggtta acgagcgcta tgttcacagc ctactttatc tctccttgct tttctcacct
1441 ctcacttacc cccattccct attaccctat tcttacctag cctcccccga cttcctcaaa
1501 acaaacaaga gatggcaaag cagcagttct accaagccca ttggaattat cctttaattt
1561 tacagatacc acttgctgta ggctacggac caagatgtcc aaaattattc ttgagcactg
1621 atataaatta cggtcttctt tgaggtcaaa attcagccat catggtaggc agtgcttgaa
1681 tgagaaaagg ctcctggtgc atcttcaaaa tgagtcctaa agaacatact gagtacttag
1741 aagtagaaga acataagatg tatttctgac taaaacaaat ggctctttca catgtgcttt
1801 attagactct gggagagaaa attaaccaag tgcttcagaa caggttttta gtatttaatt
1861 cttcacggta agaaaatgaa gttctaatga actgtttctc ccaaggtttt aaaattgtca
1921 agagttattc tgtttgttta aaaaataaga aacctcttta agcaatagat tttgcttggg
1981 ttttcttttt taaaaacata atactgtgca ggcaaggcac tgtaaaagtt ttaattcctt
2041 ccagaagaac cagtggaaga atttaaattt ggcgctacga tcaaaactac tgaattagta
2101 gaaataatga tgtctaaagc ttaccaacaa aagaaccctc agcagaataa caaaaacttt
2161 gctcaggaca tttgaggtca aattgaagac ggaaaccgga aaccgttttc ttgtaagccc
2221 ctagaggcag atcaggtaaa gcatacatag tagagggaaa ggagagaatg gaaataaaac
2281 tcaatattat gcagatttat gccttatttt ttagcatttt ttaaggttgg gtctttcagg
2341 ctggttttgg tttgtattag atctgtatag tttaattaac tggtgattta gttttatatt
2401 taagctacaa ttaatctttt ttctttggtg atatttattt ctttgccttt ttttttttta
2461 acaactttca atcttcagat gtttcgttga atctatttag agcttcacca tggcaatatg
2521 tatttccctt aaaacactgc aaacaaatat actaggagtg tgccctttta atctttacta
2581 gttattgtga gattgctgtg taagctaata aacacatttg taaatacatt gtttgcagga
2641 cgaaaacttc tgagttacag ctcaggaaaa gcctgctgaa tttatgttgt aagcattact
2701 taacacagta taaagatgaa aagacaacaa aaatatcttc atacttcctc atcccctcat
2761 tggaacaaaa accttaaact gggagaacct tagtcccctc tctttcctct tcctcctcca
2821 cttcccactt attgtcacct tgtaatattc agagagcact tggattatgg atctgaatag
2881 agaaatgctt acagataatc attagcccac ataccagtaa cttatactta aagatgggat
2941 ggagttgtaa agtgctttta taatacaata taattgttaa aggcaagggt tgactctttg
3001 ttttattttg acatggcatg tcctgaaata aatattgatt caatatggca aaaaaaaaaa
3061 aaaaaaaaaa
//