LOCUS BC003609 911 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peroxiredoxin 4, mRNA (cDNA clone MGC:1340
IMAGE:3508414), complete cds.
ACCESSION BC003609
VERSION BC003609.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 911)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 911)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC003609.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: n Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453548.
FEATURES Location/Qualifiers
source 1..911
/db_xref="H-InvDB:HIT000031638"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1340 IMAGE:3508414"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..911
/gene="PRDX4"
/gene_synonym="AOE37-2"
/db_xref="GeneID:10549"
/db_xref="HGNC:HGNC:17169"
/db_xref="MIM:606506"
CDS 4..819
/gene="PRDX4"
/gene_synonym="AOE37-2"
/codon_start=1
/product="peroxiredoxin 4"
/protein_id="AAH03609.1"
/db_xref="GeneID:10549"
/db_xref="HGNC:HGNC:17169"
/db_xref="MIM:606506"
/translation="MEALPLLAATTPDHGRHRRLLLLPLLLFLLPAGAVQGWETEERP
RTREEECHFYAGGQVYPGEASRVSVADHSLHLSKAKISKPAPYWEGTAVIDGEFKELK
LTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWI
NTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLND
LPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDKLN"
BASE COUNT 263 a 208 c 219 g 221 t
ORIGIN
1 gtcatggagg cgctgccgct gctagccgcg acaactccgg accacggccg ccaccgaagg
61 ctgcttctgc tgccgctact gctgttcctg ctgccggctg gagctgtgca gggctgggag
121 acagaggaga ggccccggac tcgcgaagag gagtgccact tctacgcggg tggacaagtg
181 tacccgggag aggcatcccg ggtatcggtc gccgaccact ccctgcacct aagcaaagcg
241 aagatttcca agccagcgcc ctactgggaa ggaacagctg tgatcgatgg agaatttaag
301 gagctgaagt taactgatta tcgtgggaaa tacttggttt tcttcttcta cccacttgat
361 ttcacatttg tgtgtccaac tgaaattatc gcttttggcg acagacttga agaattcaga
421 tctataaata ctgaagtggt agcatgctct gttgattcac agtttaccca tttggcctgg
481 attaataccc ctcgaagaca aggaggactt gggccaataa ggattccact tctttcagat
541 ttgacccatc agatctcaaa ggactatggt gtatacctag aggactcagg ccacactctt
601 agaggtctct tcattattga tgacaaagga atcctaagac aaattactct gaatgatctt
661 cctgtgggta gatcagtgga tgagacacta cgtttggttc aagcattcca gtacactgac
721 aaacacggag aagtctgccc tgctggctgg aaacctggta gtgaaacaat aatcccagat
781 ccagctggaa agctgaagta tttcgataaa ctgaattgag aaatacttct tcaagttatg
841 atgcttgaaa gttctcaata aagttcacgg tttcattacc aaaaaaaaaa aaaaaaaaaa
901 aaaaaaaaaa a
//