LOCUS BC003600 1265 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens LIM domain only 4, mRNA (cDNA clone MGC:872
IMAGE:3355972), complete cds.
ACCESSION BC003600
VERSION BC003600.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1265)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1265)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7108354.
FEATURES Location/Qualifiers
source 1..1265
/db_xref="H-InvDB:HIT000031631"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:872 IMAGE:3355972"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1265
/gene="LMO4"
/db_xref="GeneID:8543"
/db_xref="HGNC:HGNC:6644"
/db_xref="MIM:603129"
CDS 144..641
/gene="LMO4"
/codon_start=1
/product="LIM domain only 4"
/protein_id="AAH03600.1"
/db_xref="GeneID:8543"
/db_xref="HGNC:HGNC:6644"
/db_xref="MIM:603129"
/translation="MVNPGSSSQPPPVTAGSLSWKRCAGCGGKIADRFLLYAMDSYWH
SRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRLFGNSGACSACGQSIPASELVMR
AQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHDRPTALINGHLNSLQSNPLLP
DQKVC"
BASE COUNT 336 a 306 c 299 g 324 t
ORIGIN
1 cccctttcct gcttctgcga gaactccctc cctccctcca gctccgccag cccaggcgcc
61 ccttccctgg aagccgagcg gcttcgctcg catttcaccg ccgccgcctc tcgcaatatt
121 gcaatatagg ggaaaagcag accatggtga atccgggcag cagctcgcag ccgcccccgg
181 tgacggccgg ctccctctcc tggaagcggt gcgcaggctg cgggggcaag attgcggacc
241 gctttctgct ctatgccatg gacagctatt ggcacagccg gtgcctcaag tgctcctgct
301 gccaggcgca gctgggcgac atcggcacgt cctgttacac caaaagtggc atgatccttt
361 gcagaaatga ctacattagg ttatttggaa atagcggtgc ttgcagcgct tgcggacagt
421 cgattcctgc gagtgaactc gtcatgaggg cgcaaggcaa tgtgtatcat cttaagtgtt
481 ttacatgctc tacctgccgg aatcgcctgg tcccgggaga tcggtttcac tacatcaatg
541 gcagtttatt ttgtgaacat gatagaccta cagctctcat caatggccat ttgaattcac
601 ttcagagcaa tccactactg ccagaccaga aggtctgcta aaaggtcaga gtaatgcaga
661 atgcgtgcct tcatctcaga tttgttcatc acaggtggat cccatgtgtc ttcagtagac
721 aagtcacctt tgtagctagc accagtgcca gctccatgcc attgcacctt ctttagtctt
781 gattgccctt cccgcattta ttggtgtatt aaaatgactg aatatgaaca ttaaggactc
841 catgaacctg ggctaatggg agactgtaga gaaaatgaaa aaagatccac cagaggacat
901 cttggggagg gggagggagc tgggggggag ggaaatgact aatgaagcta attaaaagaa
961 gcattcaaat ctgctttcta ccctcattaa caattagcag ggcactggcc agagtttgta
1021 ccctgtgttt taccttaaca acattctatt tgctctttgt atatttaagt gttgtaagga
1081 aacgtgtttc aatcaaaact gaccatgaga taaaggaaag agatgtggct tttgtgatat
1141 tctatcacaa acacttattg tatctctgta aaatacaatg tatgtatgca tgtaagtgtt
1201 tttgtcctaa tgttgctact cccatggcaa agaaaaaaaa aagaatgaaa aaaaaaaaaa
1261 aaaaa
//