LOCUS BC003501 2166 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 3, mRNA (cDNA clone
MGC:10335 IMAGE:3530962), complete cds.
ACCESSION BC003501
VERSION BC003501.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2166)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2166)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: g Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41327713.
FEATURES Location/Qualifiers
source 1..2166
/db_xref="H-InvDB:HIT000031559"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10335 IMAGE:3530962"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2166
/gene="C20orf3"
/gene_synonym="APMAP"
/gene_synonym="BSCv"
/gene_synonym="C20ORF2"
/db_xref="GeneID:57136"
/db_xref="HGNC:HGNC:13238"
CDS 26..1276
/gene="C20orf3"
/gene_synonym="APMAP"
/gene_synonym="BSCv"
/gene_synonym="C20ORF2"
/codon_start=1
/product="chromosome 20 open reading frame 3"
/protein_id="AAH03501.1"
/db_xref="GeneID:57136"
/db_xref="HGNC:HGNC:13238"
/translation="MSEADGLRQRRPLRPQVVTDDDGQAPEAKDGSSFSGRVFRVTFL
MLAVSLTVPLLGAMMLLESPIDPQPLSFKEPPLLLGVLHPNTKLRQAERLFENQLVGP
ESIAHIGDVMFTGTADGRVVKLENGEIETIARFGSGPCKTRDDEPVCGRPLGIRAGPN
GTLFVADAYKGLFEVNPWKREVKLLLSSETPIEGKNMSFVNDLTVTQDGRKIYFTDSS
SKWQRRDYLLLVMEGTDDGRLLEYDTVTREVKVLLDQLRFPNGVQLSPAEDFVLVAET
TMARIRRVYVSGLMKGGADLFVENMPGFPDNIRPSSSGGYWVGMSTIRPNPGFSMLDF
LSERPWIKRMIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDGLVATYISEVH
EHDGHLYLGSFRSPFLCRLSLQAV"
BASE COUNT 500 a 516 c 608 g 542 t
ORIGIN
1 tgcgggtgag gctggcgccc gtaccatgag cgaggcggac gggctgcgac agcgccggcc
61 cctgcggccg caggtcgtca cagacgatga tggccaggcc ccggaggcta aggacggcag
121 ctcctttagc ggcagagttt tccgagtgac cttcttgatg ctggctgttt ctctcaccgt
181 tcccctgctt ggagccatga tgctgctgga atctcctata gatccacagc ctctcagctt
241 caaagaaccc ccgctcttgc ttggtgttct gcatccaaat acgaagctgc gacaggcaga
301 aaggctgttt gaaaatcaac ttgttggacc ggagtccata gcacatattg gggatgtgat
361 gtttactggg acagcagatg gccgggtcgt aaaacttgaa aatggtgaaa tagagaccat
421 tgcccggttt ggttcgggcc cttgcaaaac ccgagatgat gagcctgtgt gtgggagacc
481 cctgggtatc cgtgcagggc ccaatgggac tctctttgtg gccgatgcat acaagggact
541 atttgaagta aatccctgga aacgtgaagt gaaactgctg ctgtcctccg agacacccat
601 tgaggggaag aacatgtcct ttgtgaatga tcttacagtc actcaggatg ggaggaagat
661 ttatttcacc gattctagca gcaaatggca aagacgagac tacctgcttc tggtgatgga
721 gggcacagat gacgggcgcc tgctggagta tgatactgtg accagggaag taaaagtttt
781 attggaccag ctgcggttcc cgaatggagt ccagctgtct cctgcagaag actttgtcct
841 ggtggcagaa acaaccatgg ccaggatacg aagagtctac gtttctggcc tgatgaaggg
901 cggggctgat ctgtttgtgg agaacatgcc tggatttcca gacaacatcc ggcccagcag
961 ctctgggggg tactgggtgg gcatgtcgac catccgccct aaccctgggt tttccatgct
1021 ggatttctta tctgagagac cctggattaa aaggatgatt tttaagctct ttagtcaaga
1081 gacggtgatg aagtttgtgc cgcggtacag cctcgtccta gaactcagcg acagcggtgc
1141 cttccggaga agcctgcatg atcccgatgg gctggtggcc acctacatca gcgaggtgca
1201 cgaacacgat gggcacctgt acctgggctc tttcaggtcc cccttcctct gcagactcag
1261 cctccaggct gtttagccct cccagatagc tgcccctgcc acgcaggcca ggagtcttca
1321 cactcaggca ccaggcctgg tccaggagga gctgtggaca cagtcgtggt tcaagtgtcc
1381 acatgcacct attagtccct gagaggtggt gggaatggct gcttcattcc tcgaggatgc
1441 ccgggcccca cctgggcttg tctttctgtt tagagggaag tgtaacatat ctgccatgag
1501 gaacataaat tcatgtaaag ccattttctc ttaaacaaaa caaaactttc taagtacagt
1561 cattctctag gatttgggaa gctccttgca cttggaacag ggctcaggtg ggtggagcag
1621 taaggcacta cccagagagc ttgctgctgc ggccctgtcc tgcggcctca aagttcttct
1681 ttactatata taacgtgcgg tcataccttt cttcgttgtg gtggggatgg aagagcagag
1741 ggagcatggc ccaggggtgt tgaggccagc ggtgagagcc gtgttagcca agacatggaa
1801 ctgtgttctc aagggttatg tggggcgtgg gctctccata gtgtgtatga aaagcttgtt
1861 gactctagcg gctcagagag gactttgctg ggtttctttc tgtgaatatc tccgtgctga
1921 ccatgctgga attggatgat tctgcaattc gggacctact gcaggggtcc gtttagtaac
1981 gtcttgtctg tgatctttgt tcttgacctc tagaccccaa gatgtgaaca gtgcacgtgt
2041 taatgtcatc tttgctcatg tgttataagc cccaagttgc tgtatatttt cacaagtatg
2101 tctacacact ggtcatgatt ttgataataa ataacgataa atcgaaaaaa aaaaaaaaaa
2161 aaaaaa
//