LOCUS BC003394 1740 bp mRNA linear HUM 07-NOV-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein C (C1/C2),
mRNA (cDNA clone MGC:5418 IMAGE:3447724), complete cds.
ACCESSION BC003394
VERSION BC003394.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1740)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1740)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: m Column: 18.
FEATURES Location/Qualifiers
source 1..1740
/db_xref="H-InvDB:HIT000031541"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5418 IMAGE:3447724"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1740
/gene="HNRPC"
/gene_synonym="C1"
/gene_synonym="C2"
/gene_synonym="HNRNP"
/gene_synonym="hnRNPC"
/gene_synonym="SNRPC"
/db_xref="GeneID:3183"
/db_xref="HGNC:HGNC:5035"
/db_xref="MIM:164020"
CDS 176..1057
/gene="HNRPC"
/gene_synonym="C1"
/gene_synonym="C2"
/gene_synonym="HNRNP"
/gene_synonym="hnRNPC"
/gene_synonym="SNRPC"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein C
(C1/C2)"
/protein_id="AAH03394.1"
/db_xref="GeneID:3183"
/db_xref="HGNC:HGNC:5035"
/db_xref="MIM:164020"
/translation="MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIV
GCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAA
EMYGSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGF
NSKSGQRGSSKSGKLKGDDLQAIKKELTQIKQKVDSLLENLEKIEKEQSKQAVEMKND
KSEEEQSSSSVKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKE
AEEGEDDRDSANGEDDS"
BASE COUNT 495 a 347 c 411 g 487 t
ORIGIN
1 cgaagactga gcggttgtgg ccgcgttgcc gacctccagc agcagtcggc ttctctacgc
61 agaacccggg agtaggagac tcagaatcga atctcttctc cctccccttc ttgtgagatt
121 tttttgatct tcagctacat tttcggcttt gtgagaaacc ttaccatcaa acacgatggc
181 cagcaacgtt accaacaaga cagatcctcg ctccatgaac tcccgtgtat tcattgggaa
241 tctcaacact cttgtggtca agaaatctga tgtggaggca atcttttcga agtatggcaa
301 aattgtgggc tgctctgttc ataagggctt tgccttcgtt cagtatgtta atgagagaaa
361 tgcccgggct gctgtagcag gagaggatgg cagaatgatt gctggccagg ttttagatat
421 taacctggct gcagagccaa aagtgaaccg aggaaaagca ggtgtgaaac gatctgcagc
481 ggagatgtac ggctcctctt ttgacttgga ctatgacttt caacgggact attatgatag
541 gatgtacagt tacccagcac gtgtacctcc tcctcctcct attgctcggg ctgtagtgcc
601 ctcgaaacgt cagcgtgtat caggaaacac ttcacgaagg ggcaaaagtg gcttcaattc
661 taagagtgga cagcggggat cttccaagtc tggaaagttg aaaggagatg accttcaggc
721 cattaagaag gagctgaccc agataaaaca aaaagtggat tctctcctgg aaaacctgga
781 aaaaattgaa aaggaacaga gcaaacaagc agtagagatg aagaatgata agtcagaaga
841 ggagcagagc agcagctccg tgaagaaaga tgagactaat gtgaagatgg agtctgaggg
901 gggtgcagat gactctgctg aggaggggga cctactggat gatgatgata atgaagatcg
961 gggggatgac cagctggagt tgatcaagga tgatgaaaaa gaggctgagg aaggagagga
1021 tgacagagac agcgccaatg gcgaggatga ctcttaagca catagtgggg tttagaaatc
1081 ttatcccatt atttctttac ctaggcgctt gtctaagatc aaatttttca ccagatcctc
1141 tcccctagta tcttcagcac atgctcactg ttctccccat ccttgtcctt cccatgttca
1201 ttaattcata ttgccccgcg cctagtccca ttttcacttc ctttgacgct cctagtagtt
1261 ttgttaagtc ttaccctgta atttttgctt ttaattttga tacctcttta tgacttaaca
1321 ataaaaagga tgtatggttt ttatcaactg tctccaaaat aatctcttgt tatgcaggga
1381 gtacagttct tttcattcat acataagttc agtagttgct tccctaactg caaaggcaat
1441 ctcatttagt tgagtagctc ttgaaagcag ctttgagtta gaagtatgtg tgttacaccc
1501 tcacattagt gtgctgtgtg gggcagttca acacaaatgt aacaatgtat ttttgtgaat
1561 gagagttggc atgtcaaatg catcctctag aaaaataatt agtgttatag tcttaagatt
1621 tgttttctaa agttgatact gtgggttatt tttgtgaaca gcctgatgtt tgggaccttt
1681 tttcctcaaa ataaacaagt ccttattaaa ccaggaattt ggagaaaaaa aaaaaaaaaa
//