LOCUS BC003193 2156 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens leucine rich repeat containing 1, mRNA (cDNA clone
MGC:936 IMAGE:3504090), complete cds.
ACCESSION BC003193
VERSION BC003193.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2156)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2156)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: j Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40217785.
FEATURES Location/Qualifiers
source 1..2156
/db_xref="H-InvDB:HIT000031505"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:936 IMAGE:3504090"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2156
/gene="LRRC1"
/gene_synonym="dJ523E19.1"
/gene_synonym="FLJ10775"
/gene_synonym="FLJ11834"
/gene_synonym="LANO"
/db_xref="GeneID:55227"
/db_xref="HGNC:HGNC:14307"
/db_xref="MIM:608195"
CDS 278..1852
/gene="LRRC1"
/gene_synonym="dJ523E19.1"
/gene_synonym="FLJ10775"
/gene_synonym="FLJ11834"
/gene_synonym="LANO"
/codon_start=1
/product="leucine rich repeat containing 1"
/protein_id="AAH03193.1"
/db_xref="GeneID:55227"
/db_xref="HGNC:HGNC:14307"
/db_xref="MIM:608195"
/translation="MFHCIPLWRCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLD
ANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESIS
FCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRE
NLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGN
LKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQN
RLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGC
CSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDNQS
QPLLTFQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPRCGALENLVNDVSDEAWNER
AVNRVSAIRFVEDEKDEEDNETRTLLRRATPHPGELKHMKKTVENLRNDMNAAKGLDS
NKNEVNHAIDRVTTSV"
BASE COUNT 601 a 522 c 544 g 489 t
ORIGIN
1 ggaagctccg cgcggcggcg ggggcggcga cggcgactgg cgggtgggag tggaggcacc
61 ggctggcggg cgggggtaca gggacggggc aggggctccc gctccaggtt ccttgaagca
121 cttccgaccg cgaagcccgg cgcgagaagc gagctaaccc aagagccaac aacgagcgcg
181 gagagggcag cggactgagc ggagccgccg gccagagcgg gctcggagcc cgggtctccg
241 ccgctcggga cccggctagg cggcggcggg ggcggcgatg ttccactgca tccccctgtg
301 gcggtgcaac cgtcatgtgg agagcatcga caagcgccac tgctcgctgg tctacgtccc
361 cgaggagatc taccgctatg cccggagcct ggaggagctg ctgctggacg ccaaccagct
421 ccgcgagctg cccgagcaat ttttccagct agtcaaatta cgaaagcttg gacttagtga
481 taatgaaatt cagcggctcc ctccagaaat agcaaacttc atgcagctgg tggaactaga
541 tgtgtctcga aatgagattc ctgaaattcc agaaagcatt tcattctgta aagcactgca
601 ggtagctgac ttcagcggaa acccactgac taggttgcca gaaagctttc ctgaattaca
661 gaatttaaca tgtctttctg taaatgacat ctcactacag tctctacctg aaaatattgg
721 caatctttat aacctggctt cactggaact gagagagaat cttcttacat atcttcctga
781 ctctcttacc cagctgcgaa gactagaaga acttgattta ggaaacaatg aaatatataa
841 tttgccagaa tcaattggag ccctcttaca tctaaaagat ctctggttgg atggaaatca
901 actgtcagaa ttacctcagg aaataggaaa tctgaagaac ctgctgtgtt tagatgtctc
961 tgaaaacagg ttggaaagac ttcctgaaga aatcagtggc ctgacttcat taacggattt
1021 agtcatttcc cagaacttat tagaaacgat tccggatggc attggaaaac taaagaaact
1081 gtcaatcttg aaggtggatc agaatagact cacacagttg cctgaagcag ttggggaatg
1141 tgaaagtctc actgagttag ttcttacaga aaatcagctc ctgaccctgc ctaaaagcat
1201 tggaaaacta aagaagttga gcaacttgaa tgcagacaga aataaattag tgtccttacc
1261 aaaagagatc ggcgggtgct gcagcctcac tgtgttctgt gtacgtgaca acagactaac
1321 tcggatacct gcagaggtgt cacaggcaac agaacttcat gtcctggatg tggcagggaa
1381 caggttgctg catctacctt tatccctgac tgccttgaag ttgaaggctc tgtggctatc
1441 tgacaaccag tcccagcccc tgcttacatt ccagacagac acagactaca ccacaggaga
1501 gaagatttta acctgtgtct tacttcctca gctgccttct gaacctactt gtcaagagaa
1561 tctgcctcgc tgtggtgcac tggagaactt ggtaaatgat gtctctgatg aagcctggaa
1621 cgagcgtgct gtcaacagag tcagtgcgat ccgatttgtg gaggatgaga aagatgaaga
1681 agacaatgag acgagaacac ttctaaggcg agccactcca cacccagggg agttaaagca
1741 catgaaaaag acagtggaga atttacggaa tgacatgaat gctgctaaag gactggactc
1801 aaacaaaaac gaggtcaatc atgccattga ccgagtgacc acttctgtgt agagtttcac
1861 ctccaagttt tacctcctgt gtcttcctct gctgtcgaga cgttcctgtc tgcttcccgg
1921 gagcctcacg tgctccttgt cctaaccagc ccccgcgcgc catcttcccg tggagtgtgg
1981 ggaagctgct gtctcccagg aagtgcctta ctcatcccgc aaccagtcag cgcaccagtg
2041 gtctcccggt gtgatttttt ttttttttaa tttcagttgt ttgtaataag tagaatacac
2101 tactgtcaac ataaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaac
//