LOCUS BC003162 2011 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lamin A/C, mRNA (cDNA clone MGC:4219 IMAGE:2958052),
complete cds.
ACCESSION BC003162
VERSION BC003162.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2011)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2011)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27436944.
FEATURES Location/Qualifiers
source 1..2011
/db_xref="H-InvDB:HIT000031479"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4219 IMAGE:2958052"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2011
/gene="LMNA"
/gene_synonym="CDCD1"
/gene_synonym="CDDC"
/gene_synonym="CMT2B1"
/gene_synonym="EMD2"
/gene_synonym="FPL"
/gene_synonym="FPLD"
/gene_synonym="HGPS"
/gene_synonym="IDC"
/gene_synonym="LDP1"
/gene_synonym="LFP"
/gene_synonym="LGMD1B"
/gene_synonym="LMNC"
/gene_synonym="PRO1"
/db_xref="GeneID:4000"
/db_xref="HGNC:HGNC:6636"
/db_xref="MIM:150330"
CDS 166..1884
/gene="LMNA"
/gene_synonym="CDCD1"
/gene_synonym="CDDC"
/gene_synonym="CMT2B1"
/gene_synonym="EMD2"
/gene_synonym="FPL"
/gene_synonym="FPLD"
/gene_synonym="HGPS"
/gene_synonym="IDC"
/gene_synonym="LDP1"
/gene_synonym="LFP"
/gene_synonym="LGMD1B"
/gene_synonym="LMNC"
/gene_synonym="PRO1"
/codon_start=1
/product="lamin A/C"
/protein_id="AAH03162.1"
/db_xref="GeneID:4000"
/db_xref="HGNC:HGNC:6636"
/db_xref="MIM:150330"
/translation="METPSQRRATRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAV
YIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARL
QLELSKVREEFKELKARNTKKEGDLIAAQARLKDLEALLNSKEAALSTALSEKRTLEG
ELHDLRGQVAKLEAALGEAKKQLQDEMLRRVDAENRLQTMKEELDFQKNIYSEELRET
KRRHETRLVEIDNGKQREFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQ
SAERNSNLVGAAHEELQQSRIRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTS
RRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPS
PTSQRSRGRASSHSSQTQGGGSVTKKRKLESTESRSSFSQHARTSGRVAVEEVDEEGK
FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGAGATHSP
PTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVRSVTVVEDDEDEDGDDLLHHHH
VSGSRR"
BASE COUNT 458 a 597 c 663 g 293 t
ORIGIN
1 ccgaggtccg acagcgcccg gcccagatcc ccacgcctgc caggagcaag ccgagagcca
61 gccggccggc gcactccgac tccgagcagt ctctgtcctt cgacccgagc cccgcgccct
121 ttccgggacc cctgccccgc gggcagcgct gccaacctgc cggccatgga gaccccgtcc
181 cagcggcgcg ccacccgcag cggggcgcag gccagctcca ctccgctgtc gcccacccgc
241 atcacccggc tgcaggagaa ggaggacctg caggagctca atgatcgctt ggcggtctac
301 atcgaccgtg tgcgctcgct ggaaacggag aacgcagggc tgcgccttcg catcaccgag
361 tctgaagagg tggtcagccg cgaggtgtcc ggcatcaagg ccgcctacga ggccgagctc
421 ggggatgccc gcaagaccct tgactcagta gccaaggagc gcgcccgcct gcagctggag
481 ctgagcaaag tgcgtgagga gtttaaggag ctgaaagcgc gcaataccaa gaaggagggt
541 gacctgatag ctgctcaggc tcggctgaag gacctggagg ctctgctgaa ctccaaggag
601 gccgcactga gcactgctct cagtgagaag cgcacgctgg agggcgagct gcatgatctg
661 cggggccagg tggccaagct tgaggcagcc ctaggtgagg ccaagaagca acttcaggat
721 gagatgctgc ggcgggtgga tgctgagaac aggctgcaga ccatgaagga ggaactggac
781 ttccagaaga acatctacag tgaggagctg cgtgagacca agcgccgtca tgagacccga
841 ctggtggaga ttgacaatgg gaagcagcgt gagtttgaga gccggctggc ggatgcgctg
901 caggaactgc gggcccagca tgaggaccag gtggagcagt ataagaagga gctggagaag
961 acttattctg ccaagctgga caatgccagg cagtctgctg agaggaacag caacctggtg
1021 ggggctgccc acgaggagct gcagcagtcg cgcatccgca tcgacagcct ctctgcccag
1081 ctcagccagc tccagaagca gctggcagcc aaggaggcga agcttcgaga cctggaggac
1141 tcactggccc gtgagcggga caccagccgg cggctgctgg cggaaaagga gcgggagatg
1201 gccgagatgc gggcaaggat gcagcagcag ctggacgagt accaggagct tctggacatc
1261 aagctggccc tggacatgga gatccacgcc taccgcaagc tcttggaggg cgaggaggag
1321 aggctacgcc tgtcccccag ccctacctcg cagcgcagcc gtggccgtgc ttcctctcac
1381 tcatcccaga cacagggtgg gggcagcgtc accaaaaagc gcaaactgga gtccactgag
1441 agccgcagca gcttctcaca gcacgcacgc actagcgggc gcgtggccgt ggaggaggtg
1501 gatgaggagg gcaagtttgt ccggctgcgc aacaagtcca atgaggacca gtccatgggc
1561 aattggcaga tcaagcgcca gaatggagat gatcccttgc tgacttaccg gttcccacca
1621 aagttcaccc tgaaggctgg gcaggtggtg acgatctggg ctgcaggagc tggggccacc
1681 cacagccccc ctaccgacct ggtgtggaag gcacagaaca cctggggctg cgggaacagc
1741 ctgcgtacgg ctctcatcaa ctccactggg gaagaagtgg ccatgcgcaa gctggtgcgc
1801 tcagtgactg tggttgagga cgacgaggat gaggatggag atgacctgct ccatcaccac
1861 cacgtgagtg gtagccgccg ctgaggccga gcctgcactg gggccaccca gccaggcctg
1921 ggggcagcct ctccccagcc tccccgtgcc aaaaatcttt tcattaaaga atgttttgga
1981 acttttaaaa aaaaaaaaaa aaaaaaaaaa a
//