LOCUS BC003161 1556 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens twinfilin, actin-binding protein, homolog 2
(Drosophila), mRNA (cDNA clone MGC:4217 IMAGE:2957960), complete
cds.
ACCESSION BC003161
VERSION BC003161.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1556)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1556)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: d Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40068460.
FEATURES Location/Qualifiers
source 1..1556
/db_xref="H-InvDB:HIT000031478"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4217 IMAGE:2957960"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1556
/gene="TWF2"
/gene_synonym="A6r"
/gene_synonym="A6RP"
/gene_synonym="MSTP011"
/gene_synonym="PTK9L"
/db_xref="GeneID:11344"
/db_xref="HGNC:HGNC:9621"
/db_xref="MIM:607433"
CDS 69..1118
/gene="TWF2"
/gene_synonym="A6r"
/gene_synonym="A6RP"
/gene_synonym="MSTP011"
/gene_synonym="PTK9L"
/codon_start=1
/product="twinfilin, actin-binding protein, homolog 2
(Drosophila)"
/protein_id="AAH03161.1"
/db_xref="GeneID:11344"
/db_xref="HGNC:HGNC:9621"
/db_xref="MIM:607433"
/translation="MAHQTGIHATEELKEFFAKARAGSVRLIKVVIEDEQLVLGASQE
PVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYA
ATRATVKKEFGGGHIKDELFGTVKDDLSFAGYQKHLSSCAAPAPLTSAERELQQIRIN
EVKTEISVESKHQTLQGLAFPLQPEAQRALQQLKQKMVNYIQMKLDLERETIELVHTE
PTDVAQLPSRVPRDAARYHFFLYKHTHEGDPLESVVFIYSMPGYKCSIKERMLYSSCK
SRLLDSVEQDFHLEIAKKIEIGDGAELTAEFLYDEVHPKQHAFKQAFAKPKGPGGKRG
HKRLIRGPGENGDDS"
BASE COUNT 334 a 458 c 484 g 280 t
ORIGIN
1 agcgagcgtt gccgggccag ggtcaagcgg agggctccga cggcgcggac ggagcgaagc
61 gccgagccat ggcgcaccaa acgggcatcc acgccacgga agagctgaag gaattctttg
121 ccaaggcacg ggctggctct gtgcggctca tcaaggttgt gattgaggac gagcagctcg
181 tgctgggtgc ctcgcaggag ccagtaggcc gctgggatca ggactatgac agggccgtgc
241 tgccactgct ggacgcccag cagccctgct acctgctcta ccgcctcgac tcacagaatg
301 ctcagggctt cgaatggctc ttcctcgcct ggtcgcctga taactccccc gtgcggctga
361 agatgctgta cgcggccacg cgggccacag tgaaaaagga gtttggaggt ggccacatca
421 aggatgagct cttcgggact gtgaaggatg acctctcttt tgctgggtac cagaaacacc
481 tgtcgtcctg tgcggcacct gccccgctga cctcggctga gagagagctc cagcagatcc
541 gcattaacga ggtgaagaca gagatcagtg tggaaagcaa gcaccagacc ctgcagggcc
601 tcgccttccc cctgcagcct gaggcccagc gggcactcca gcagctcaag cagaaaatgg
661 tcaactacat ccagatgaag ctggacctag agcgggaaac cattgagctg gtgcacacag
721 agcccacgga tgtggcccag ctgccctccc gggtgccccg agatgctgcc cgctaccact
781 tcttcctcta caagcacacc catgagggcg acccccttga gtctgtagtg ttcatctact
841 ccatgccggg gtacaagtgc agcatcaagg agcgaatgct ctactccagc tgcaagagcc
901 gcctcctcga ctccgtggag caggacttcc atctggagat cgccaagaaa attgagattg
961 gcgatggggc agagctgacg gcagagttcc tctacgacga ggtgcacccc aagcaacacg
1021 ccttcaagca ggccttcgcc aagcccaagg gcccaggggg caagcggggc cataagcgcc
1081 tcatccgcgg cccgggtgaa aatggggatg acagctagga ggctggagca gggccggcca
1141 cgtgtggact gtggggctgc ccaccttccg ctccctgcca ccatcctcct tcctgggctc
1201 caggaaagtg tttctgggag gtcaggaggg ctggcagctg aacgcacttg cagcgtccga
1261 gggccaccgg gctggcattt tgtgaccctt ccctgttgct gtccctgcat ctcgtctgtg
1321 tgcccagggt gtccggggac cctgcctggc tggcttaagg gggctgggtc aggggcctgg
1381 catgaacctg gcctcccggg gagctgagac tagggtccca gcacagccca gaaacctttg
1441 gccacaagaa gtggggtcag tcagggctgg ggcaggggtc actgcagttt gggatggttg
1501 aatgctgtat tttctaaaga ataaaatatt tttaaatcaa aaaaaaaaaa aaaaaa
//