LOCUS BC003119 1261 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens ATP synthase, H+ transporting, mitochondrial F1
complex, alpha subunit 1, cardiac muscle, mRNA (cDNA clone
IMAGE:3356657), partial cds.
ACCESSION BC003119
VERSION BC003119.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1261)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1261)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: g Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1261
/db_xref="H-InvDB:HIT000086214"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3356657"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1261
/gene="ATP5A1"
/gene_synonym="ATP5A"
/gene_synonym="hATP1"
/gene_synonym="OMR"
/gene_synonym="ORM"
/db_xref="GeneID:498"
/db_xref="HGNC:HGNC:823"
/db_xref="IMGT/GENE-DB:823"
/db_xref="MIM:164360"
CDS <1..1107
/gene="ATP5A1"
/gene_synonym="ATP5A"
/gene_synonym="hATP1"
/gene_synonym="OMR"
/gene_synonym="ORM"
/codon_start=1
/product="ATP5A1 protein"
/protein_id="AAH03119.1"
/db_xref="GeneID:498"
/db_xref="HGNC:HGNC:823"
/db_xref="IMGT/GENE-DB:823"
/db_xref="MIM:164360"
/translation="REPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQ
KRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQY
LAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH
SRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKG
IRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLL
SRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQH
QALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA"
BASE COUNT 342 a 269 c 299 g 351 t
ORIGIN
1 cgggaaccaa tgcagactgg cattaaggct gtggatagct tggtgccaat tggtcgtggt
61 cagcgtgaac tgattattgg tgaccgacag actgggaaaa cctcaattgc tattgacaca
121 atcattaacc agaaacgttt caatgatgga tctgatgaaa agaagaagct gtactgtatt
181 tatgttgcta ttggtcaaaa gagatccact gttgcccagt tggtgaagag acttacagat
241 gcagatgcca tgaagtacac cattgtggtg tcggctacgg cctcggatgc tgccccactt
301 cagtacctgg ctccttactc tggctgttcc atgggagagt attttagaga caatggcaaa
361 catgctttga tcatctatga cgacttatcc aaacaggctg ttgcttaccg tcagatgtct
421 ctgttgctcc gccgaccccc tggtcgtgag gcctatcctg gtgatgtgtt ctacctacac
481 tcccggttgc tggagagagc agccaaaatg aacgatgctt ttggtggtgg ctccttgact
541 gctttgccag tcatagaaac acaggctggt gatgtgtctg cttacattcc aacaaatgtc
601 atttccatca ctgacggaca gatcttcttg gaaacagaat tgttctacaa aggtatccgc
661 cctgcaatta acgttggtct gtctgtatct cgtgtcggat ccgctgccca aaccagggct
721 atgaagcagg tagcaggtac catgaagctg gaattggctc agtatcgtga ggttgctgct
781 tttgcccagt tcggttctga cctcgatgct gccactcaac aacttttgag tcgtggcgtg
841 cgtctaactg agttgctgaa gcaaggacag tattctccca tggctattga agaacaagtg
901 gctgttatct atgcgggtgt aaggggatat cttgataaac tggagcccag caagattaca
961 aagtttgaga atgctttctt gtctcatgtc gtcagccagc accaagcctt gttgggcact
1021 atcagggctg atggaaagat ctcagaacaa tcagatgcaa agctgaaaga gattgtaaca
1081 aatttcttgg ctggatttga agcttaaact cctgtggatt cacatcaaat accagttcag
1141 ttttgtcatt gttctagtaa attagttcca tttgtaaaag ggttactctc atactcctta
1201 tgtacagaaa tcacatgaaa aataaaggtt ccataatgca taaaaaaaaa aaaaaaaaaa
1261 a
//