LOCUS BC003104 1411 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine zipper, down-regulated in cancer 1, mRNA (cDNA
clone MGC:1897 IMAGE:3503444), complete cds.
ACCESSION BC003104
VERSION BC003104.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1411)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1411)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22035627.
FEATURES Location/Qualifiers
source 1..1411
/db_xref="H-InvDB:HIT000031432"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1897 IMAGE:3503444"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1411
/gene="LDOC1"
/db_xref="GeneID:23641"
/db_xref="HGNC:HGNC:6548"
/db_xref="MIM:300402"
CDS 79..519
/gene="LDOC1"
/codon_start=1
/product="leucine zipper, down-regulated in cancer 1"
/protein_id="AAH03104.1"
/db_xref="GeneID:23641"
/db_xref="HGNC:HGNC:6548"
/db_xref="MIM:300402"
/translation="MVDELVLLLHALLMRHRALSIENSQLMEQLRLLVCERASLLRQV
RPPSCPVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEE
WVVPYIEMDSPILGDYRAFLDEMKQCFGWDDDEDDDDEEEEDDY"
BASE COUNT 331 a 443 c 336 g 301 t
ORIGIN
1 cgcacttcct gcgagggctc cgtgcgcacc ttggccgagc cgaaccgagc cgagtcctgt
61 ccttccaggc cgttcgcaat ggtggatgag ttggtgctgc tgctgcacgc gctcctgatg
121 cggcaccgcg ccctgagcat cgagaacagc cagctcatgg aacagctgcg gctgctggtg
181 tgcgagaggg ccagcctgct gcgccaggta cgtccgccga gctgcccggt gcccttcccc
241 gaaacgttta atggcgagag ctcccggctc cccgagttta tcgtgcagac ggcgtcttac
301 atgctcgtga acgagaaccg attctgcaac gacgccatga aggtggcatt cctaatcagc
361 ctcctcaccg gggaagccga ggagtgggtg gtgccctaca tcgagatgga tagccccatc
421 ctaggtgatt accgggcctt cctcgatgag atgaaacagt gctttggctg ggatgacgac
481 gaagacgacg acgacgaaga agaggaggat gattattagg ccctcgaccc tcgggcctcg
541 ggggggaggg ccctgcacgc cgccaccccc tccccgcagc cctcaccccg ccaggagcca
601 ctgctctccc ccttgccctc cggtcccctt acctacccgc gcccgtctgc tctctctctt
661 catttctccg tagtgcttgt ctttgttcca ggaatagcgc tccagttacc tgctgctggg
721 gtcggggctg gagcctcact cactcggaag tgcttggaag tgtcatctac cctggccatc
781 cccgggatcc ctcccctgct aatctgaact gtgtcctgaa ccccagctat tggccaggcc
841 cctgttacaa actgcgcaga ccacccgtag ccctgctgct gccacctgcc ctgctgccag
901 gcttacatct tcccagagaa ctatgctgcc acttcacatc cactcaccac atcccaccta
961 cagactacca cctttcgaga tcaggaccaa cctggaaaat gccagagttg gctatgcctt
1021 ttcagacatt gatttggaca gctcaccaac ccctgaaggg gccgttcagc ctggttagtt
1081 ttctacctac tccgagtgtc ctcccctgcc ccaccagatt gctgcagggg cgcggtgtgc
1141 ctggcagcca aattgttgac acttcttttt tcctatgcac tggttttaca cagctgtcat
1201 ttttctttca aaattgcagc agtcccacag atgtgtgcat ttggacaaat agtacttaaa
1261 aacaaaacaa acaagcactc agcccagctc ctcaatacta cctggaaaaa gcattggcat
1321 tattttcaat aaatatcaag cactaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaacctcgg g
//