LOCUS BC003094 3967 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens tubulin folding cofactor D, mRNA (cDNA clone MGC:1538
IMAGE:3503192), complete cds.
ACCESSION BC003094
VERSION BC003094.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3967)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3967)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: h Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41350332.
FEATURES Location/Qualifiers
source 1..3967
/db_xref="H-InvDB:HIT000031423"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1538 IMAGE:3503192"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3967
/gene="TBCD"
/gene_synonym="KIAA0988"
/db_xref="GeneID:6904"
/db_xref="HGNC:HGNC:11581"
/db_xref="MIM:604649"
CDS 131..3709
/gene="TBCD"
/gene_synonym="KIAA0988"
/codon_start=1
/product="tubulin folding cofactor D"
/protein_id="AAH03094.1"
/db_xref="GeneID:6904"
/db_xref="HGNC:HGNC:11581"
/db_xref="MIM:604649"
/translation="MALSDEPAAGGPEEEAEDETLAFGAALEAFGESAETRALLGRLR
EVHGGGAEREVALERFRVIMDKYQEQPHLLDPHLEWMMNLLLDIVQDQTSPASLVHLA
FKFLYIITKVRGYKTFLRLFPHEVADVEPVLDLVTIQNPKDHEAWETRYMLLLWLSVT
CLIPFDFSRLDGNLLTQPGQARMSIMDRILQIAESYLIVSDKARDAAAVLVSRFITRP
DVKQSKMAEFLDWSLCNLARSSFQTMQGVITMDGTLQALAQIFKHGKREDCLPYAATV
LRCLDGCRLPESNQTLLRKLGVKLVQRLGLTFLKPKVAAWRYQRGCRSLAANLQLLTQ
GQSEQKPLILTEDDDEDDDVPEGVERVIEQLLVGLKDKDTVVRWSAAKGIGRMAGRLP
RALADDVVGSVLDCFSFQETDKAWHGGCLALAELGRRGLLLPSRLVDVVAVILKALTY
DEKRGACSVGTNVRDAACYVCWAFARAYEPQELKPFVTAISSALVIAAVFDRDINCRR
AASAAFQENVGRQGTFPHGIDILTTADYFAVGNRSNCFLVISVFIAGFPEYTQPMIDH
LVTMKISHWDGVIRELAARALHNLAQQAPEFSATQVFPRLLSMTLSPDLHMRHGSILA
CAEVAYALYKLAAQENRPVTDHLDEQAVQGLKQIHQQLYDRQLYRGLGGQLMRQAVCV
LIEKLSLSKMPFRGDTVIDGWQWLINDTLRHLHLISSHSRQQMKDAAVSALAALCSEY
YMKEPGEADPAIQEELITQYLAELRNPEEMTRCGFSLALGALPGFLLKGRLQQVLTGL
RAVTHTSPEDVSFAESRRDGLKAIARICQTVGVKAGAPDEAVCGENVSQIYCALLGCM
DDYTTDSRGDVGTWVRKAAMTSLMDLTLLLARSQPELIEAHTCERIMCCVAQQASEKI
DRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVASVNWSAPSQAFPRITQL
LGLPTYRYHVLLGLVVSLGGLTESTIRHSTQSLFEYMKGIQSDPQALGSFSGTLLQIF
EDNLLNERVSVPLLKTLDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIKNSKDIQKL
LSGIAVFCGMVQFPGDVRRQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDVVGAD
VLDEVVTVLSDTAWDAELAVVREQRNRLCDLLGVPRPQLVPQPGAC"
BASE COUNT 815 a 1102 c 1188 g 862 t
ORIGIN
1 ggccagcgtc ggttgccgcc ttagcgggcg cctccttttc atccctcatc cttcatccct
61 ggctttcgcg ctctagcgga gtgggatctg cgaacacgtg aggcgggggc gcggtcccca
121 ggctgccgag atggccctga gcgacgaacc ggccgcgggt ggccccgagg aggaggcgga
181 ggacgagaca ctggcctttg gcgcggcgct ggaagcgttc ggcgagagcg cggagacccg
241 ggcgctgctg ggccgcctgc gggaggtgca cggcggcggc gcggagcgcg aggtggccct
301 ggagcggttc cgcgtaataa tggacaaata ccaggagcag cctcatctgt tggacccgca
361 ccttgaatgg atgatgaact tgttgttgga catagtgcaa gatcagacat ctccagcttc
421 ccttgtacat ctggctttta aatttcttta catcatcacc aaggttcgag gctataaaac
481 atttcttcgt ttatttcctc atgaagttgc cgatgtagag cctgttttag atttggtcac
541 aattcagaat cccaaggacc atgaagcttg ggaaacccgc tacatgcttt tgctctggct
601 ctccgtgacc tgcctgatcc cttttgattt ttctcgcctt gacgggaacc tcctcaccca
661 gcctgggcaa gcacgaatgt ccataatgga ccgtattctc caaatagcag agtcctactt
721 gattgtcagt gacaaggccc gagatgcagc tgctgtcctt gtgtccagat ttatcacacg
781 tcctgatgtc aagcaaagca agatggctga gttcctggac tggagcctgt gcaatctggc
841 ccgttcctcc ttccagacca tgcagggggt catcaccatg gatgggacgc tgcaggccct
901 ggcacaaata tttaaacatg gaaaacgtga agactgtttg ccctatgctg ccactgtcct
961 caggtgcctc gatggctgca gactccctga gagcaaccag accctgctgc ggaagctggg
1021 ggtgaagctt gtgcagcgac tggggctgac attcctgaag ccgaaggtgg cagcatggag
1081 gtaccagcgt ggctgccgat ctttggctgc aaatctgcag ctcctcactc agggtcagag
1141 tgagcagaag ccactcatcc tgaccgaaga tgacgacgaa gatgacgacg tcccagaggg
1201 ggtggagcgt gtgatagagc agctgctggt cgggctgaag gacaaggaca cggtcgtgcg
1261 gtggtctgca gccaagggca tcggtaggat ggctggcagg cttcccagag ccctggcgga
1321 tgatgtggtc gggtctgtgc tggactgctt cagtttccag gagactgaca aggcgtggca
1381 tgggggatgt ctggcgctgg cagagctggg caggagaggc ctgttgctgc cgtctcgact
1441 cgtggatgtt gtcgccgtga tcctgaaggc gctgacctac gacgagaagc ggggtgcctg
1501 cagcgtgggc accaacgtca gggacgccgc ctgctacgtg tgctgggcct tcgcgcgtgc
1561 ctatgagcct caggagctga agccctttgt gactgcaatc tcgagtgcac tggtgattgc
1621 tgcggtgttt gaccgagaca taaactgcag aagagcagcc tctgccgcct tccaggagaa
1681 tgtggggaga cagggcactt tccctcatgg tattgatatt ttgaccacag ctgactattt
1741 tgccgtcggt aacagatcca actgtttcct ggttataagt gtgtttattg ccggctttcc
1801 tgagtacacg cagccaatga tagaccacct ggttaccatg aagatcagcc actgggatgg
1861 ggtcatccga gagttggctg cgagggcgct gcacaacctg gcccagcagg cacccgagtt
1921 cagcgccacg caagtcttcc cgaggctgct gtccatgaca ctgagtccag atcttcacat
1981 gaggcatggg tcgattctcg cctgcgcaga agttgcttac gccttgtaca aacttgcagc
2041 ccaagagaac aggcccgtca cggaccatct ggacgagcag gcagtgcagg gcctgaagca
2101 gattcaccag cagctctatg atcgtcagtt atacaggggt ctgggaggac agctcatgag
2161 acaagcagtg tgtgttttaa tagaaaagtt gtcactttcc aaaatgccct ttagaggtga
2221 caccgtaatt gatggttggc aatggctgat aaatgacact ttgagacatc tccatctcat
2281 ctcaagtcac tcccgccagc agatgaagga tgcagcagtc tcggccctgg ctgctctatg
2341 cagtgaatat tacatgaagg agccggggga ggcagatccc gcaattcagg aggagctgat
2401 cacgcagtac ctggctgagc ttcggaaccc cgaggagatg actcgctgtg gcttctcgtt
2461 ggccttgggc gcccttccag gcttccttct gaaaggccgg ctccagcagg ttctcacagg
2521 tttaagagca gttacccaca cttcccccga ggacgtaagt tttgctgagt ccaggagaga
2581 cggcttgaag gccattgcga ggatttgcca gactgttggt gtgaaagcag gagccccaga
2641 cgaagctgtg tgcggagaga atgtttccca gatttactgt gcgctgctgg gctgcatgga
2701 cgactacacc acggacagca gaggggacgt gggcacctgg gtccgcaagg ccgccatgac
2761 cagtctgatg gatctgacac ttctgctggc tcggagccag cctgagctga tcgaggccca
2821 tacctgtgag cgcatcatgt gctgtgtggc ccagcaggcc agtgagaaga ttgaccgttt
2881 ccgtgctcac gccgccagcg tgttcctgac gctcctgcac tttgacagcc ctcccatccc
2941 ccacgtgccc caccgaggag aactggaaaa gctgtttccc aggtccgatg tggcctccgt
3001 gaactggagt gcaccttccc aggccttccc acgcatcacc cagctccttg ggctgcccac
3061 ctaccgctac cacgtcctgc tggggctagt cgtgtccctg ggcggcttga cggagtcgac
3121 gatccggcac tccacccaga gcctctttga gtacatgaag ggcattcaga gcgacccgca
3181 ggccctgggc agcttcagcg ggacccttct gcagatcttt gaggacaacc ttctgaatga
3241 gagggtgtcc gtgccgctgc tgaagacgct ggaccacgtg ctcacccacg gctgcttcga
3301 catcttcacc acggaggagg accacccctt tgctgtgaag ttgcttgcgc tctgtaagaa
3361 agaaatcaag aattcaaaag atatccagaa gctcctgtca ggcatcgcag tgttctgcgg
3421 gatggtgcag ttccccggcg acgtgaggag gcaggccctc ctgcagctgt gtctgctcct
3481 ctgccaccgt ttcccgctga tccggaagac cacggccagc caggtgtacg agacattgct
3541 cacctacagt gacgtcgtgg gcgcggatgt gctggacgag gtggtgactg tgctcagtga
3601 cactgcgtgg gacgcggagc ttgcagtggt gagagagcag cgcaaccgtc tgtgtgacct
3661 tctgggcgta cccaggcccc agctggtgcc ccagcctggt gcctgctgaa gccagtcctg
3721 gagcccatac ctcacccctg cctggtgagg atgtcttgtt cctgagggag gccggtgtgg
3781 aaagcctcgc acagtggtgc ctccagctgt tgaagggtag cgctggccct tggaggctgg
3841 cactagctga cagcttttcc tctctgcacc tgcgctctgg tgacttgggg tggacgcctc
3901 tgccttcact tgaacacaaa tgtgcttcct ataaaatcat gtaccaagaa aaaaaaaaaa
3961 aaaaaaa
//