LOCUS BC003090 1637 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens COP9 constitutive photomorphogenic homolog subunit 8
(Arabidopsis), mRNA (cDNA clone MGC:1297 IMAGE:3503287), complete
cds.
ACCESSION BC003090
VERSION BC003090.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1637)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1637)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: d Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40805828.
FEATURES Location/Qualifiers
source 1..1637
/db_xref="H-InvDB:HIT000031419"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1297 IMAGE:3503287"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1637
/gene="COPS8"
/gene_synonym="COP9"
/gene_synonym="CSN8"
/gene_synonym="MGC1297"
/gene_synonym="SGN8"
/db_xref="GeneID:10920"
/db_xref="HGNC:HGNC:24335"
CDS 49..678
/gene="COPS8"
/gene_synonym="COP9"
/gene_synonym="CSN8"
/gene_synonym="MGC1297"
/gene_synonym="SGN8"
/codon_start=1
/product="COP9 constitutive photomorphogenic homolog
subunit 8 (Arabidopsis)"
/protein_id="AAH03090.1"
/db_xref="GeneID:10920"
/db_xref="HGNC:HGNC:24335"
/translation="MPVAVMAESAFSFKKLLDQCENQELEAPGGIATPPVYGQLLALY
LLHNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETV
QPIMEALRDATRRRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTR
MVLPRKPVAGALDVSFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN"
BASE COUNT 474 a 327 c 340 g 496 t
ORIGIN
1 ctggggtttg gctgtccgga cggtgcagcg gcgaggccgg ccgcgaagat gccagtggcg
61 gtgatggcgg aaagcgcctt tagtttcaaa aagttgctgg atcagtgcga gaaccaggag
121 ctcgaggccc ctggaggaat tgctacaccc ccagtgtatg gtcagcttct agctttatat
181 ttgctccata atgacatgaa taatgcaaga tatctttgga aaagaatacc acctgctata
241 aaatctgcaa attctgaact tgggggaatt tggtcagtag gacaaagaat ctggcagaga
301 gatttccctg ggatctatac aaccatcaac gctcaccagt ggtctgagac ggtccagcca
361 attatggaag cacttagaga tgcaacaagg agacgcgcct ttgccctggt ctctcaagcg
421 tatacttcaa tcatcgccga tgattttgca gcctttgttg gacttcctgt agaagaggct
481 gtgaaaggca tattagaaca aggatggcaa gctgattcca ccacaagaat ggttctgccc
541 agaaagccag ttgcaggggc cctggatgtt tcctttaaca agtttattcc cttatcagag
601 cctgctccag ttcccccaat acccaatgaa cagcagttag ccagactgac ggattatgtg
661 gctttccttg aaaactgatt tatcactctg agttcaagat tcatcttcag aatcctgtat
721 actgacaaac gtagaaatgt aaagtttgta ttttcaattt attggatggc ttaagcacct
781 cagcattcct tactatgtga taaaatacat atagaatata agatatacta tatacatttt
841 gtccataaac gttatgctga atagttgttg aaacagttct cattttgtag tatttaataa
901 tctggatgga gcctgtcagt attacagtta gttttctagt gactcataaa ataagatttc
961 ctgtttcatg tagaatagtg tttgtcaact gtcttttctc tgtcccagca catgccgtac
1021 tcttatatgt accattggtt gataattata atgattcatt tggacttgaa gaaagattgt
1081 ccccaggcac agtatctgaa tcactgggga ttatgattca ccctctttgg agaacatgct
1141 ctcttttcac cccccacctc ctgagagcca ctaatgtaag atacagaaac atagctgagg
1201 aacaaataga ccatttccat actaaaccag tttgttaact ttagattttt tccaatagtg
1261 tgagtatatc cattgctggc agtggagggc ttgccatgaa aatgcaactt atttaagaca
1321 tttatgagac atattaactt gtgctgtcgc cttttagaag gagaaactta agtgtggaat
1381 gcattatatg ggcaaagaag ctatgaagat acatgataca ctttgtacaa ctatcctgca
1441 gcccattggt tgcttatatt tatcgcttgg ctcaagttct gccctttgga gaaatactga
1501 gcaagtcttt cattctctgt gtgacagccc tctgaatatt tgaagttgtt tgttgtaact
1561 taaggttata acagccctta gttcatttac tctgcatttg ttcaataaat atttaactga
1621 aaaaaaaaaa aaaaaaa
//