LOCUS BC003050 1242 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA
(cDNA clone MGC:750 IMAGE:3543809), complete cds.
ACCESSION BC003050
VERSION BC003050.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1242)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1242)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: e Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29540561.
FEATURES Location/Qualifiers
source 1..1242
/db_xref="H-InvDB:HIT000258897"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:750 IMAGE:3543809"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1242
/gene="HMGN2"
/gene_synonym="MGC5629"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
CDS 96..368
/gene="HMGN2"
/gene_synonym="MGC5629"
/codon_start=1
/product="high-mobility group nucleosomal binding domain
2"
/protein_id="AAH03050.1"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
/translation="MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKA
PAKKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGDAK"
BASE COUNT 381 a 255 c 280 g 326 t
ORIGIN
1 gaagaggcga gaacgacccc cggaccgacc aaagcccgcg cgccgctgca tcccgcgtcc
61 agcacctacg tcccgctgcc gtcgccgccg ccaccatgcc caagagaaag gctgaagggg
121 atgctaaggg agataaagca aaggtgaagg acgaaccaca gagaagatcc gcgaggttgt
181 ctgctaaacc tgctcctcca aagccagagc ccaagcctaa aaaggcccct gcaaagaagg
241 gagagaaggt acccaaaggg aaaaagggaa aagctgatgc tggcaaggag gggaataacc
301 ctgcagaaaa tggagatgcc aaaacagacc aggcacagaa agctgaaggt gctggagatg
361 ccaagtgaag tgtgtgcatt tttgataact gtgtacttct ggtgactgta cagtttgaaa
421 tactattttt tatcaagttt tataaaaatg cagaattttg ttttactttt tttttttttt
481 ttaaaagcta tgttgttagc acacagaaca cttcattgtt gtttttgggg gaaggggcat
541 atgtcactaa tagaatgtct ccaaagctgg attgatgtgg agaaaacacc tttcccttct
601 agttttgaga gacttcctct tggctcccag gaggagggat tccctgactt tgacacacat
661 ggccaccttg gcacaaaagc cttgtggtat agaaaaacaa atttgttttt atgtcctctt
721 ctccctttcc atctttcagc atagacttaa ctcccttaag cccagacatc tgttgagacc
781 tgacccctag tcattggtta ccagtgtgtc aggcaatctg gactttccag tgatgccact
841 gagatggcac ctgtcaaaag agcagtggtt ccatttctag attgtggatc ttcagataaa
901 ttctgccatt ttcatttcac ttcctgaaag tcagggtcgg cttgtgaaaa gttgttaaac
961 aacatgctaa atgtgaaatg tcaaccctca ctctaaactt tccctgttca gagcatcaga
1021 tgaagacttc attgggtttt atagtggctt tctgattttt ggtagtccat tgaagaaggg
1081 agtttgaaag ttgttgtata ctgttaacga ttgtctgccc atgtcctgcc tgaaatacca
1141 tgattgttta tggaaagtat ctttaataaa gctggataca gtttggcttg ggaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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