LOCUS BC003043 999 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ADP-ribosylation factor 5, mRNA (cDNA clone MGC:4370
IMAGE:2822973), complete cds.
ACCESSION BC003043
VERSION BC003043.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 999)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 999)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: a Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6995999.
FEATURES Location/Qualifiers
source 1..999
/db_xref="H-InvDB:HIT000031384"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4370 IMAGE:2822973"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..999
/gene="ARF5"
/db_xref="GeneID:381"
/db_xref="HGNC:HGNC:658"
/db_xref="MIM:103188"
CDS 38..580
/gene="ARF5"
/codon_start=1
/product="ADP-ribosylation factor 5"
/protein_id="AAH03043.1"
/db_xref="GeneID:381"
/db_xref="HGNC:HGNC:658"
/db_xref="MIM:103188"
/translation="MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVT
TIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQE
SADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCA
TQGTGLYDGLDWLSHELSKR"
BASE COUNT 206 a 280 c 291 g 222 t
ORIGIN
1 cccgcgtcgg tgcccgcgcc cctccccggg ccccgccatg ggcctcaccg tgtccgcgct
61 cttttcgcgg atcttcggga agaagcagat gcggattctc atggttggct tggatgcggc
121 tggcaagacc acaatcctgt acaaactgaa gttgggggag attgtcacca ccatcccaac
181 cataggcttc aatgtagaaa cagtggaata taagaacatc tgtttcacag tctgggacgt
241 gggaggccag gacaagattc ggcctctgtg gcggcactac ttccagaaca ctcagggcct
301 catctttgtg gtggacagta atgaccggga gcgggtccaa gaatctgctg atgaactcca
361 gaagatgctg caggaggacg agctgcggga tgcagtgctg ctggtatttg ccaacaagca
421 ggacatgccc aacgccatgc ccgtgagcga gctgactgac aagctggggc tacagcactt
481 acgcagccgc acgtggtatg tccaggccac ctgtgccacc caaggcacag gtctgtacga
541 tggtctggac tggctgtccc acgagctgtc aaagcgctaa ccagccaggg gcaggcccct
601 gatgcccgga agctcctgcg tgcatccccg gatgaccata ctcccggact cctcaggcag
661 tgccctttcc tcccactttt cctcccccat agccacaggc ctctgctcct gctcctgcct
721 gcatgttctc tctgttgttg gagcctggag ccttgctctc tgggcacaga ggggtccact
781 ctcctgcctg ctgggaccta tggaaggggc ttcctggcca aggccccctc ttccagagga
841 ggagcaggga tctgggtttc cttttttttt tctgttttgg gtgtactcta ggggccaggt
901 tgggaggggg aaggtgaggg cttcgggtgg tgctataatg tggcactgga tcttgagtaa
961 taaatttgct gtggtttgaa aaaaaaaaaa aaaaaaaaa
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