LOCUS BC003022 948 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peroxiredoxin 2, mRNA (cDNA clone MGC:4104
IMAGE:2821457), complete cds.
ACCESSION BC003022
VERSION BC003022.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 948)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 948)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: h Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33188453.
FEATURES Location/Qualifiers
source 1..948
/db_xref="H-InvDB:HIT000031366"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4104 IMAGE:2821457"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..948
/gene="PRDX2"
/gene_synonym="MGC4104"
/gene_synonym="NKEFB"
/gene_synonym="PRP"
/gene_synonym="PRXII"
/gene_synonym="TSA"
/db_xref="GeneID:7001"
/db_xref="HGNC:HGNC:9353"
/db_xref="MIM:600538"
CDS 60..656
/gene="PRDX2"
/gene_synonym="MGC4104"
/gene_synonym="NKEFB"
/gene_synonym="PRP"
/gene_synonym="PRXII"
/gene_synonym="TSA"
/codon_start=1
/product="peroxiredoxin 2"
/protein_id="AAH03022.1"
/db_xref="GeneID:7001"
/db_xref="HGNC:HGNC:9353"
/db_xref="MIM:600538"
/translation="MASGNARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYP
LDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIP
LLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQ
AFQYTDEHGEVCPAGWKPGSDTIKPNVDDSKEYFSKHN"
BASE COUNT 224 a 272 c 259 g 193 t
ORIGIN
1 cgcgggtcca cgcgtgtgat cgtccgtgcg tctagccttt gcccacgcag ctttcagtca
61 tggcctccgg taacgcgcgc atcggaaagc cagcccctga cttcaaggcc acagcggtgg
121 ttgatggcgc cttcaaagag gtgaagctgt cggactacaa agggaagtac gtggtcctct
181 ttttctaccc tctggacttc acttttgtgt gccccaccga gatcatcgcg ttcagcaacc
241 gtgcagagga cttccgcaag ctgggctgtg aagtgctggg cgtctcggtg gactctcagt
301 tcacccacct ggcttggatc aacacccccc ggaaagaggg aggcttgggc cccctgaaca
361 tccccctgct tgctgacgtg accagacgct tgtctgagga ttacggcgtg ctgaaaacag
421 atgagggcat tgcctacagg ggcctcttta tcatcgatgg caagggtgtc cttcgccaga
481 tcactgttaa tgatttgcct gtgggacgct ccgtggatga ggctctgcgg ctggtccagg
541 ccttccagta cacagacgag catggggaag tttgtcccgc tggctggaag cctggcagtg
601 acacgattaa gcccaacgtg gatgacagca aggaatattt ctccaaacac aattaggctg
661 gctaacggat agtgagcttg tgcccctgcc taggtgcctg tgctgggtgt ccacctgtgc
721 ccccacctgg gtgccctatg ctgacccagg aaaggccaga cctgcccctc caaactccac
781 agtatgggac cctggagggc taggccaagg ccttctcatg cctccaccta gaagctgaat
841 agtgacgccc tcccccaagc ccacccagcc gcacacaggc ctagaggtaa ccaataaagt
901 attagggaaa ggtgaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//