LOCUS BC003021 1720 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tubulin, beta 3, mRNA (cDNA clone MGC:4055
IMAGE:2823044), complete cds.
ACCESSION BC003021
VERSION BC003021.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1720)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1720)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50592995.
FEATURES Location/Qualifiers
source 1..1720
/db_xref="H-InvDB:HIT000086205"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4055 IMAGE:2823044"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1720
/gene="TUBB3"
/gene_synonym="beta-4"
/gene_synonym="MC1R"
/gene_synonym="TUBB4"
/db_xref="GeneID:10381"
/db_xref="HGNC:HGNC:20772"
/db_xref="MIM:602661"
CDS 50..1402
/gene="TUBB3"
/gene_synonym="beta-4"
/gene_synonym="MC1R"
/gene_synonym="TUBB4"
/codon_start=1
/product="tubulin, beta 3"
/protein_id="AAH03021.2"
/db_xref="GeneID:10381"
/db_xref="HGNC:HGNC:20772"
/db_xref="MIM:602661"
/translation="MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQL
ERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWA
KGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYP
DRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLA
TPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAR
GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQ
SKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRK
AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESEAQGPK
"
BASE COUNT 355 a 548 c 506 g 311 t
ORIGIN
1 gcccggcccg cccgcgcccg tccgcagccg cccgccagac gcgcccagta tgagggagat
61 cgtgcacatc caggccggcc agtgcggcaa ccagatcggg gccaagttct gggaagtcat
121 cagtgatgag catggcatcg accccagcgg caactacgtg ggcgactcgg acttgcagct
181 ggagcggatc agcgtctact acaacgaggc ctcttctcac aagtacgtgc ctcgagccat
241 tctggtggac ctggaacccg gaaccatgga cagtgtccgc tcaggggcct ttggacatct
301 cttcaggcct gacaatttca tctttggtca gagtggggcc ggcaacaact gggccaaggg
361 tcactacacg gagggggcgg agctggtgga ttcggtcctg gatgtggtgc ggaaggagtg
421 tgaaaactgc gactgcctgc agggcttcca gctgacccac tcgctggggg gcggcacggg
481 ctccggcatg ggcacgttgc tcatcagcaa ggtgcgtgag gagtatcccg accgcatcat
541 gaacaccttc agcgtcgtgc cctcacccaa ggtgtcagac acggtggtgg agccctacaa
601 cgccacgctg tccatccacc agctggtgga gaacacggat gagacctact gcatcgacaa
661 cgaggcgctc tacgacatct gcttccgcac cctcaagctg gccacgccca cctacgggga
721 cctcaaccac ctggtatcgg ccaccatgag cggagtcacc acctccttgc gcttcccggg
781 ccagctcaac gctgacctgc gcaagctggc cgtcaacatg gtgcccttcc cgcgcctgca
841 cttcttcatg cccggcttcg cccccctcac agcccggggc agccagcagt accgggccct
901 gaccgtgccc gagctcaccc agcagatgtt cgatgccaag aacatgatgg ccgcctgcga
961 cccgcgccac ggccgctacc tgacggtggc caccgtgttc cggggccgca tgtccatgaa
1021 ggaggtggac gagcagatgc tggccatcca gagcaagaac agcagctact tcgtggagtg
1081 gatccccaac aacgtgaagg tggccgtgtg tgacatcccg ccccgcggcc tcaagatgtc
1141 ctccaccttc atcgggaaca gcacggccat ccaggagctg ttcaagcgca tctccgagca
1201 gttcacggcc atgttccggc gcaaggcctt cctgcactgg tacacgggcg agggcatgga
1261 cgagatggag ttcaccgagg ccgagagcaa catgaacgac ctggtgtccg agtaccagca
1321 gtaccaggac gccacggccg aggaagaggg cgagatgtac gaagacgacg aggaggagtc
1381 ggaggcccag ggccccaagt gaagctgctc gcagctggag tgagaggcag gtggcggccg
1441 gggccgaagc cagcagtgtc taaacccccg gagccatctt gctgccgaca ccctgctttc
1501 ccctcgccct agggctccct tgccgccctc ctgcagtatt tatggcctcg tcctccccac
1561 ctaggccacg tgtgagctgc tcctgtctct gtcttattgc agctccaggc ctgacgtttt
1621 acggttttgt tttttactgg tttgtgttta tattttcggg gatacttaat aaatctattg
1681 ctgtcagata cccttaaaaa aaaaaaaaaa aaaaaaaaaa
//