LOCUS BC003019 1258 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dehydrogenase/reductase (SDR family) member 4, mRNA
(cDNA clone MGC:4052 IMAGE:2822884), complete cds.
ACCESSION BC003019
VERSION BC003019.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1258)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1258)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: l Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32483356.
FEATURES Location/Qualifiers
source 1..1258
/db_xref="H-InvDB:HIT000031364"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4052 IMAGE:2822884"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1258
/gene="DHRS4"
/gene_synonym="DHRS4L2"
/gene_synonym="FLJ11008"
/gene_synonym="humNRDR"
/gene_synonym="SCAD-SRL"
/gene_synonym="SDR-SRL"
/db_xref="GeneID:10901"
/db_xref="HGNC:HGNC:16985"
CDS 3..839
/gene="DHRS4"
/gene_synonym="DHRS4L2"
/gene_synonym="FLJ11008"
/gene_synonym="humNRDR"
/gene_synonym="SCAD-SRL"
/gene_synonym="SDR-SRL"
/codon_start=1
/product="dehydrogenase/reductase (SDR family) member 4"
/protein_id="AAH03019.1"
/db_xref="GeneID:10901"
/db_xref="HGNC:HGNC:16985"
/translation="MHKAGLLGLCARAWNSVRMASSGMTRRDPLANKVALVTASTDGI
GFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVAT
AVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRG
GGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTS
FSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGGGTPS
RL"
BASE COUNT 296 a 318 c 390 g 254 t
ORIGIN
1 ccatgcacaa ggcggggctg ctaggcctct gtgcccgggc ttggaattcg gtgcggatgg
61 ccagctccgg gatgacccgc cgggacccgc tcgcaaataa ggtggccctg gtaacggcct
121 ccaccgacgg gatcggcttc gccatcgccc ggcgtttggc ccaggacggg gcccatgtgg
181 tcgtcagcag ccggaagcag cagaatgtgg accaggcggt ggccacgctg cagggggagg
241 ggctgagcgt gacgggcacc gtgtgccatg tggggaaggc ggaggaccgg gagcggctgg
301 tggccacggc tgtgaagctt catggaggta tcgatatcct agtctccaat gctgctgtca
361 accctttctt tggaagcata atggatgtca ctgaggaggt gtgggacaag actctggaca
421 ttaatgtgaa ggccccagcc ctgatgacaa aggcagtggt gccagaaatg gagaaacgag
481 gaggcggctc agtggtgatc gtgtcttcca tagcagcctt cagtccatct cctggcttca
541 gtccttacaa tgtcagtaaa acagccttgc tgggcctgac caagaccctg gccatagagc
601 tggccccaag gaacattagg gtgaactgcc tagcacctgg acttatcaag actagcttca
661 gcaggatgct ctggatggac aaggaaaaag aggaaagcat gaaagaaacc ctgcggataa
721 gaaggttagg cgagccagag gattgtgctg gcatcgtgtc tttcctgtgc tctgaagatg
781 ccagctacat cactggggaa acagtggtgg tgggtggagg aaccccgtcc cgcctctgag
841 gaccgggaga cagcccacag gccagagttg ggctctagct cctggtgctg ttcctgcatt
901 cacccactgg cctttcccac ctctgctcac cttactgttc acctcatcaa atcagttctg
961 ccctgtgaaa agatccagcc ttccctgccg tcaaggtggc gtcttactcg ggattcctgc
1021 tgttgttgtg gccttgggta aaggcctccc ctgagaacac aggacaggcc tgctgacaag
1081 gctgagtcta ccttggcaaa gaccaagata ttttttcctg ggccactggg gaatctgagg
1141 ggtgatggga gagaaggaac ctggagtgga aggagcagag ttgcaaatta acaacttgca
1201 aatgaggtgc aaataaaatg cagatgattg cgcggctttg aaaaaaaaaa aaaaaaaa
//