LOCUS BC003014 1057 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens nth endonuclease III-like 1 (E. coli), mRNA (cDNA
clone MGC:4044 IMAGE:2821314), complete cds.
ACCESSION BC003014
VERSION BC003014.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1057)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1057)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: h Column: 5.
FEATURES Location/Qualifiers
source 1..1057
/db_xref="H-InvDB:HIT000031361"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4044 IMAGE:2821314"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1057
/gene="NTHL1"
/gene_synonym="NTH1"
/gene_synonym="OCTS3"
/db_xref="GeneID:4913"
/db_xref="MIM:602656"
CDS 4..918
/gene="NTHL1"
/gene_synonym="NTH1"
/gene_synonym="OCTS3"
/codon_start=1
/product="NTHL1 protein"
/protein_id="AAH03014.1"
/db_xref="GeneID:4913"
/db_xref="MIM:602656"
/translation="MTALSARMLTRSRSLGPGAGPRGCREEPGPLRRREAAAEARKSH
SPVKRPRKAQRLRVAYEGSDSEKGEGAEPLKVPVWEPQDWQQQLVNIRAMRNKKDAPV
DHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTD
DATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAM
AVAWGTVSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVG
FGQQTCLPVHPRCHACLNQALCPAAQGL"
misc_feature 364..909
/gene="NTHL1"
/gene_synonym="NTH1"
/gene_synonym="OCTS3"
/note="Nth; Region: Predicted EndoIII-related endonuclease
[DNA replication, recombination, and repair]"
/db_xref="CDD:COG0177"
BASE COUNT 240 a 300 c 352 g 165 t
ORIGIN
1 ggcatgaccg ccttgagcgc gaggatgctg acccggagcc ggagcctggg acccggggct
61 gggccgcggg ggtgtaggga ggagcccggg cctctccgga gaagagaggc tgcagcagaa
121 gcgaggaaaa gccacagccc cgtgaagcgt ccgcggaaag cacagagact gcgtgtggcc
181 tatgagggct cggacagtga gaaaggtgag ggggctgagc ccctcaaggt gccagtctgg
241 gagccccagg actggcagca acagctggtc aacatccgtg ccatgaggaa caaaaaggat
301 gcacctgtgg accatctggg gactgagcac tgctatgact ccagtgcccc cccaaaggta
361 cgcaggtacc aggtgctgct gtcactgatg ctctccagcc aaaccaaaga ccaggtgacg
421 gcgggcgcca tgcagcgact gcgggcgcgg ggcctgacgg tggacagcat cctgcagaca
481 gatgatgcca cgctgggcaa gctcatctac cccgtcggtt tctggaggag caaggtgaaa
541 tacatcaagc agaccagcgc catcctgcag cagcactacg gtggggacat cccagcctct
601 gtggccgagc tggtggcgct gccgggtgtt gggcccaaga tggcacacct ggctatggct
661 gtggcctggg gcactgtgtc aggcattgca gtggacacgc atgtgcacag aatcgccaac
721 aggctgaggt ggaccaagaa ggcaaccaag tccccagagg agacccgcgc cgccctggag
781 gagtggctgc ctagggagct gtggcacgag atcaatggac tcttggtggg cttcggccag
841 cagacctgtc tgcctgtgca ccctcgctgc cacgcctgcc tcaaccaagc cctctgcccg
901 gccgcccagg gtctctgatg gccgcatggc tctggccgag gtgccgctgt ggccaccgtc
961 tgtgaagtgg ctttacgctt caggaagcca cgcctgttga ataaagcttt ggtgtgtttg
1021 cagatggaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//