LOCUS BC003000 2020 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 3 (activators of dibasic and
neutral amino acid transport), member 2, mRNA (cDNA clone MGC:3977
IMAGE:2821990), complete cds.
ACCESSION BC003000
VERSION BC003000.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2020)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2020)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: n Column: 11.
FEATURES Location/Qualifiers
source 1..2020
/db_xref="H-InvDB:HIT000031348"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3977 IMAGE:2821990"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2020
/gene="SLC3A2"
/gene_synonym="4F2"
/gene_synonym="4F2HC"
/gene_synonym="4T2HC"
/gene_synonym="CD98"
/gene_synonym="CD98HC"
/gene_synonym="NACAE"
/db_xref="GeneID:6520"
/db_xref="HGNC:HGNC:11026"
/db_xref="MIM:158070"
CDS 127..1833
/gene="SLC3A2"
/gene_synonym="4F2"
/gene_synonym="4F2HC"
/gene_synonym="4T2HC"
/gene_synonym="CD98"
/gene_synonym="CD98HC"
/gene_synonym="NACAE"
/codon_start=1
/product="solute carrier family 3 (activators of dibasic
and neutral amino acid transport), member 2"
/protein_id="AAH03000.2"
/db_xref="GeneID:6520"
/db_xref="HGNC:HGNC:11026"
/db_xref="MIM:158070"
/translation="MELQPPEASIAVVSIPRQLPGSHSEAGVQGLSAGDDSGTMSQDT
EVDMKEVELNELEPEKQPMNAASGAAMSLAGAEKNGLVKIKVAEDEAEAAAAAKFTGL
SKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCRELPAQKWWHTG
ALYRIGDLQAFQGHGAGNLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQI
DPNFGSKEDFDSLLQSAKKKSIRVILDLTPNYRGENSWFSTQVDTVATKVKDALEFWL
QAGVDGFQVRDIENLKDASSFLAEWQNITKGFSEDRLLIAGTNSSDLQQILSLLESNK
DLLLTSSYLSDSGSTGEHTKSLVTQYLNATGNRWCSWSLSQARLLTSFLPAQLLRLYQ
LMLFTLPGTPVFSYGDEIGLDAAALPGQPMEAPVMLWDESSFPDIPGAVSANMTVKGQ
SEDPGSLLSLFRRLSDQRSKERSLLHGDFHAFSAGPGLFSYIRHWDQNERFLVVLNFG
DVGLSAGLQASDLPASASLPAKADLLLSTQPGREEGSPLELERLKLEPHEGLLLRFPY
AA"
BASE COUNT 421 a 584 c 574 g 441 t
ORIGIN
1 gcaggagcgg tgagatcact gcctcacggc gatcctggac tgacggtcac gactgcctac
61 cctctaaccc tgttctgagc tgccccttgc ccacacaccc caaacctgtg tgcaggatcc
121 gcctccatgg agctacagcc tcctgaagcc tcgatcgccg tcgtgtcgat tccgcgccag
181 ttgcctggct cacattcgga ggctggtgtc cagggtctca gcgcggggga cgactcaggc
241 accatgagcc aggacaccga ggtggatatg aaggaggtgg agctgaatga gttagagccc
301 gagaagcagc cgatgaacgc ggcgtctggg gcggccatgt ccctggcggg agccgagaag
361 aatggtctgg tgaagatcaa ggtggcggaa gacgaggcgg aggcggcagc cgcggctaag
421 ttcacgggcc tgtccaagga ggagctgctg aaggtggcag gcagccccgg ctgggtacgc
481 acccgctggg cactgctgct gctcttctgg ctcggctggc tcggcatgct tgctggtgcc
541 gtggtcataa tcgtgcgagc gccgcgttgt cgcgagctac cggcgcagaa gtggtggcac
601 acgggcgccc tctaccgcat cggcgacctt caggccttcc agggccacgg cgcgggcaac
661 ctggcgggtc tgaaggggcg tctcgattac ctgagctctc tgaaggtgaa gggccttgtg
721 ctgggtccaa ttcacaagaa ccagaaggat gatgtcgctc agactgactt gctgcagatc
781 gaccccaatt ttggctccaa ggaagatttt gacagtctct tgcaatcggc taaaaaaaag
841 agcatccgtg tcattctgga ccttactccc aactaccggg gtgagaactc gtggttctcc
901 actcaggttg acactgtggc caccaaggtg aaggatgctc tggagttttg gctgcaagct
961 ggcgtggatg ggttccaggt tcgggacata gagaatctga aggatgcatc ctcattcttg
1021 gctgagtggc aaaatatcac caagggcttc agtgaagaca ggctcttgat tgcggggact
1081 aactcctccg accttcagca gatcctgagc ctactcgaat ccaacaaaga cttgctgttg
1141 actagctcat acctgtctga ttctggttct actggggagc atacaaaatc cctagtcaca
1201 cagtatttga atgccactgg caatcgctgg tgcagctgga gtttgtctca ggcaaggctc
1261 ctgacttcct tcttgccggc tcaacttctc cgactctacc agctgatgct cttcaccctg
1321 ccagggaccc ctgttttcag ctacggggat gagattggcc tggatgcagc tgcccttcct
1381 ggacagccta tggaggctcc agtcatgctg tgggatgagt ccagcttccc tgacatccca
1441 ggggctgtaa gtgccaacat gactgtgaag ggccagagtg aagaccctgg ctccctcctt
1501 tccttgttcc ggcggctgag tgaccagcgg agtaaggagc gctccctact gcatggggac
1561 ttccacgcgt tctccgctgg gcctggactc ttctcctata tccgccactg ggaccagaat
1621 gagcgttttc tggtagtgct taactttggg gatgtgggcc tctcggctgg actgcaggcc
1681 tccgacctgc ctgccagcgc cagcctgcca gccaaggctg acctcctgct cagcacccag
1741 ccaggccgtg aggagggctc ccctcttgag ctggaacgcc tgaaactgga gcctcacgaa
1801 gggctgctgc tccgcttccc ctacgcggcc tgacttcagc ctgacatgga cccactaccc
1861 ttctcctttc cttcccaggc cctttggctt ctgatttttc tcttttttaa aaacaaacaa
1921 acaaactgtt gcagattatg agtgaacccc caaatagggt gttttctgcc ttcaaataaa
1981 agtcacccct gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//