LOCUS BC002978 1333 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD81 molecule, mRNA (cDNA clone MGC:2221
IMAGE:3510634), complete cds.
ACCESSION BC002978
VERSION BC002978.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1333)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1333)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: a Column: 1.
FEATURES Location/Qualifiers
source 1..1333
/db_xref="H-InvDB:HIT000031330"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2221 IMAGE:3510634"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1333
/gene="CD81"
/gene_synonym="S5.7"
/gene_synonym="TSPAN28"
/db_xref="GeneID:975"
/db_xref="HGNC:HGNC:1701"
/db_xref="MIM:186845"
CDS 41..751
/gene="CD81"
/gene_synonym="S5.7"
/gene_synonym="TSPAN28"
/codon_start=1
/product="CD81 molecule"
/protein_id="AAH02978.1"
/db_xref="GeneID:975"
/db_xref="HGNC:HGNC:1701"
/db_xref="MIM:186845"
/translation="MGVEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNL
LYLELGDKPAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILF
ACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSS
TLTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIF
EMILSMVLCCGIRNSSVY"
BASE COUNT 273 a 398 c 356 g 306 t
ORIGIN
1 ccggcccgcg ccccgcaggc cgcccgccgc ccgcgccgcc atgggagtgg agggctgcac
61 caagtgcatc aagtacctgc tcttcgtctt caatttcgtc ttctggctgg ctggaggcgt
121 gatcctgggt gtggccctgt ggctccgcca tgacccgcag accaccaacc tcctgtatct
181 ggagctggga gacaagcccg cgcccaacac cttctatgta ggcatctaca tcctcatcgc
241 tgtgggcgct gtcatgatgt tcgttggctt cctgggctgc tacggggcca tccaggaatc
301 ccagtgcctg ctggggacgt tcttcacctg cctggtcatc ctgtttgcct gtgaggtggc
361 cgccggcatc tggggctttg tcaacaagga ccagatcgcc aaggatgtga agcagttcta
421 tgaccaggcc ctacagcagg ccgtggtgga tgatgacgcc aacaacgcca aggctgtggt
481 gaagaccttc cacgagacgc ttgactgctg tggctccagc acactgactg ctttgaccac
541 ctcagtgctc aagaacaatt tgtgtccctc gggcagcaac atcatcagca acctcttcaa
601 ggaggactgc caccagaaga tcgatgacct cttctccggg aagctgtacc tcatcggcat
661 tgctgccatc gtggtcgctg tgatcatgat cttcgagatg atcctgagca tggtgctgtg
721 ctgtggcatc cggaacagct ccgtgtactg aggccccgca gctctggcca cagggacctc
781 tgcagtgccc cctaagtgac ccggacactt ccgagggggc catcaccgcc tgtgtatata
841 acgtttccgg tattactctg ctacacgtag cctttttact tttggggttt tgtttttgtt
901 ctgaactttc ctgttacctt ttcagggctg acgtcacatg taggtggcgt gtatgagtgg
961 agacgggcct gggtcttggg gactggaggg caggggtcct tctgccctgg ggtcccaggg
1021 tgctctgcct gctcagccag gcctctcctg ggagccactc gcccagagac tcagcttggc
1081 caacttgggg ggctgtgtcc acccagcccg cccgtcctgt gggctgcaca gctcaccttg
1141 ttccctcctg ccccggttcg agagccgagt ctgtgggcac tctctgcctt catgcacctg
1201 tcctttctaa cacgtcgcct tcaactgtaa tcacaacatc ctgactccgt catttaataa
1261 agaaggaaca tcaggcatgc taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aac
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