LOCUS BC002931 2578 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 10, mRNA (cDNA
clone MGC:11369 IMAGE:3955575), complete cds.
ACCESSION BC002931
VERSION BC002931.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2578)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2578)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC002931.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: i Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13123771.
FEATURES Location/Qualifiers
source 1..2578
/db_xref="H-InvDB:HIT000031296"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11369 IMAGE:3955575"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2578
/gene="CNOT10"
/gene_synonym="DKFZP434K115"
/gene_synonym="FLJ12890"
/gene_synonym="FLJ13165"
/db_xref="GeneID:25904"
/db_xref="HGNC:HGNC:23817"
CDS 225..2459
/gene="CNOT10"
/gene_synonym="DKFZP434K115"
/gene_synonym="FLJ12890"
/gene_synonym="FLJ13165"
/codon_start=1
/product="CCR4-NOT transcription complex, subunit 10"
/protein_id="AAH02931.1"
/db_xref="GeneID:25904"
/db_xref="HGNC:HGNC:23817"
/translation="MAADKPADQGAEKHEGTGQSSGITDQEKELSTNAFQAFTSGNYD
ACLQHLACLQDINKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAVEEMD
GLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYI
LTYQAEKALHLLAVLEKMISQGNNNKNGKNETGNNNNKDGSNHKAESGALIEAAKSKI
HQYKVRAYIQMKSLKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSS
NIAEHPGFMKTGECLRCMFWNNLGCIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGS
TDPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHANPRLW
LRLAECCIAANKGTSEQETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNTVYNDGQS
SAIPVASMEFAAICLRNALLLLPEEQQDPKQENGAKNSNQLGGNTESSESSETCSSKS
HDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNLMALNHADKLLQQPKLS
GSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAME
SSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEA
ILLAVYLELQNGNTQLALQIIKRNQLLPAVKTHSEVRKKPVFQPVHPIQPIQMPAFTT
VQRK"
BASE COUNT 799 a 557 c 583 g 639 t
ORIGIN
1 gtggcggtcc cttggtgggg aagctgttgc tgttgctaga cgacgggaac tagctctcgt
61 cacttcctca gcccgccgtc tgcccactcc tctagccgga acctgggggc ccggagccgg
121 ggtaggcaca gagttgtcct cggaggtcca ggacagcggc cagcccggcg gcgggagtca
181 gggccacgcc acctgcaggg aagaacccga gtcgaagcgg gaagatggct gcagacaagc
241 ctgcagatca gggagcagag aaacatgaag gcacaggtca gtcctctggg atcactgatc
301 aagagaagga gttatccacc aatgctttcc aagctttcac atctggaaat tatgatgcct
361 gtctacaaca ccttgcctgt ctacaagata taaacaaaga tgattataaa ataattttga
421 atacagcagt agctgagttt tttaaaagta accaaacaac aacagataat ttgagacaaa
481 cacttaacca gctgaagaat caggtccact cagctgttga agaaatggat ggattagatg
541 atgttgaaaa cagcatgttg tactataatc aagcagtcat tctttatcat ctgcggcagt
601 atacagaagc catatcagtt ggtgaaaaac tttatcagtt catagagcct tttgaagaaa
661 aatttgccca agcagtgtgt tttttgcttg tagacctgta tatattaacc taccaagctg
721 agaaagcttt gcatcttctt gctgtcctag aaaaaatgat ttcacagggt aacaataaca
781 aaaatggaaa gaatgagact ggtaataaca acaacaaaga tggatctaat cataaagctg
841 aaagtggagc tctaatagaa gctgcaaaat caaagataca tcagtacaaa gtacgagctt
901 atatccaaat gaagtctctg aaagcatgta aaagggaaat caagtcagtc atgaatacag
961 ctggaaattc cgcaccctct ctctttctta aaagcaattt tgagtactta agaggtaatt
1021 atcgaaaagc cgtgaagcta ttaaatagtt caaacattgc tgagcatcca ggattcatga
1081 aaacaggtga atgcttgaga tgcatgttct ggaataacct tggttgcatc cattttgcca
1141 tgagcaagca caatttggga atattctact ttaaaaaggc tctgcaagag aatgacaatg
1201 tctgtgcaca gctcagtgca ggtagcactg atccaggtaa aaaattttca ggaagaccca
1261 tgtgtacgtt actaaccaat aagagatatg agttgctgta taactgtgga attcagcttc
1321 ttcacattgg aaggcctctt gctgccttcg aatgtctgat tgaagctgtt caggtttatc
1381 atgcaaatcc tcgcctctgg ctacggctgg ctgaatgctg cattgctgcc aataagggga
1441 cttctgaaca agaaactaaa ggccttccca gcaaaaaagg aattgtacag tctattgttg
1501 gtcaaggcta tcatcgtaaa atagttttgg catcacagtc tatacagaat actgtttata
1561 atgatggtca gtcttcggcc attcctgtag ccagtatgga gtttgcagcc atatgtctca
1621 gaaatgcctt gttgctgcta cctgaagaac agcaagatcc aaagcaggaa aatggggcta
1681 aaaatagtaa tcaattaggt gggaacacag agagcagcga aagcagtgaa acttgcagca
1741 gtaaaagcca tgatggagat aaattcattc cagctccacc ttcttctcca ttgagaaaac
1801 aggaattaga aaacttaaag tgctccatac ttgcttgcag tgcctacgtg gctctggctt
1861 tgggtgataa cctcatggct ttgaatcatg cagataaact tcttcagcag cccaagctgt
1921 caggatctct taagtttttg ggacatttat atgctgcaga agccctcatc tctctcgaca
1981 gaatatctga tgccattact cacttgaacc cggagaatgt cactgatgtc tccttaggga
2041 tctcttcaaa tgagcaggac caaggatcag acaaaggtga aaatgaagca atggaatcct
2101 ctggtaagcg ggcccctcag tgctacccca gttccgtcaa ctctgccagg actgtgatgc
2161 tgttcaacct tggcagcgct tactgcctga ggagcgaata tgacaaagcc cgaaagtgtc
2221 tccaccaggc ggcttcaatg atccatccta aagaggtgcc ccctgaggcc atcttgctgg
2281 cagtctacct tgaactgcag aatggtaata ctcagctggc cttacagatc atcaaaagga
2341 atcagctgct ccctgcagtg aaaacacact ctgaagtgag aaagaagcca gtgtttcagc
2401 ctgtccaccc gatccagccc atccaaatgc cggctttcac cactgtgcag agaaagtgat
2461 acttcacttt tggaaaactg ttacctgaga cccaggggag aatttactgg ccattttagt
2521 tgtatcacag cagaatgaat aaaagatggt gaaggctgtt aaaaaaaaaa aaaaaaaa
//