LOCUS BC002788 1353 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens plasminogen activator, urokinase receptor, mRNA (cDNA
clone MGC:3905 IMAGE:3617894), complete cds.
ACCESSION BC002788
VERSION BC002788.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1353)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1353)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002788.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: j Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53829377.
FEATURES Location/Qualifiers
source 1..1353
/db_xref="H-InvDB:HIT000031184"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3905 IMAGE:3617894"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1353
/gene="PLAUR"
/gene_synonym="CD87"
/gene_synonym="UPAR"
/gene_synonym="URKR"
/db_xref="GeneID:5329"
/db_xref="HGNC:HGNC:9053"
/db_xref="MIM:173391"
CDS 66..1073
/gene="PLAUR"
/gene_synonym="CD87"
/gene_synonym="UPAR"
/gene_synonym="URKR"
/codon_start=1
/product="plasminogen activator, urokinase receptor"
/protein_id="AAH02788.1"
/db_xref="GeneID:5329"
/db_xref="HGNC:HGNC:9053"
/db_xref="MIM:173391"
/translation="MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQD
LCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGN
SGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRP
KDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYS
CKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGD
AFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLW
T"
BASE COUNT 316 a 398 c 367 g 272 t
ORIGIN
1 ccttcctgag gccagaagga gagaagacgt gcagggaccc cgcgcacagg agctgccctc
61 gcgacatggg tcacccgccg ctgctgccgc tgctgctgct gctccacacc tgcgtcccag
121 cctcttgggg cctgcggtgc atgcagtgta agaccaacgg ggattgccgt gtggaagagt
181 gcgccctggg acaggacctc tgcaggacca cgatcgtgcg cttgtgggaa gaaggagaag
241 agctggagct ggtggagaaa agctgtaccc actcagagaa gaccaacagg accctgagct
301 atcggactgg cttgaagatc accagcctta ccgaggttgt gtgtgggtta gacttgtgca
361 accagggcaa ctctggccgg gctgtcacct attcccgaag ccgttacctc gaatgcattt
421 cctgtggctc atcagacatg agctgtgaga ggggccggca ccagagcctg cagtgccgca
481 gccctgaaga acagtgcctg gatgtggtga cccactggat ccaggaaggt gaagaagggc
541 gtccaaagga tgaccgccac ctccgtggct gtggctacct tcccggctgc ccgggctcca
601 atggtttcca caacaacgac accttccact tcctgaaatg ctgcaacacc accaaatgca
661 acgagggccc aatcctggag cttgaaaatc tgccgcagaa tggccgccag tgttacagct
721 gcaaggggaa cagcacccat ggatgctcct ctgaagagac tttcctcatt gactgccgag
781 gccccatgaa tcaatgtctg gtagccaccg gcactcacga accgaaaaac caaagctata
841 tggtaagagg ctgtgcaacc gcctcaatgt gccaacatgc ccacctgggt gacgccttca
901 gcatgaacca cattgatgtc tcctgctgta ctaaaagtgg ctgtaaccac ccagacctgg
961 atgtccagta ccgcagtggg gctgctcctc agcctggccc tgcccatctc agcctcacca
1021 tcaccctgct aatgactgcc agactgtggg gaggcactct cctctggacc taaacctgaa
1081 atccccctct ctgccctggc tggatccggg ggaccccttt gcccttccct cggctcccag
1141 ccctacagac ttgctgtgtg acctcaggcc agtgtgccga cctctctggg cctcagtttt
1201 cccagctatg aaaacagcta tctcacaaag ttgtgtgaag cagaagagaa aagctggagg
1261 aaggccgtgg gccaatggga gagctcttgt tattattaat attgttgccg ctgttgtgtt
1321 gttgttatta attaaaaaaa aaaaaaaaaa aaa
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