LOCUS BC002758 1878 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens adenosine deaminase, tRNA-specific 1, mRNA (cDNA clone
MGC:3393 IMAGE:3632079), complete cds.
ACCESSION BC002758
VERSION BC002758.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1878)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1878)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002758.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: m Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7382475.
FEATURES Location/Qualifiers
source 1..1878
/db_xref="H-InvDB:HIT000031161"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3393 IMAGE:3632079"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1878
/gene="ADAT1"
/gene_synonym="HADAT1"
/db_xref="GeneID:23536"
/db_xref="HGNC:HGNC:228"
/db_xref="MIM:604230"
CDS 116..1624
/gene="ADAT1"
/gene_synonym="HADAT1"
/codon_start=1
/product="adenosine deaminase, tRNA-specific 1"
/protein_id="AAH02758.1"
/db_xref="GeneID:23536"
/db_xref="HGNC:HGNC:228"
/db_xref="MIM:604230"
/translation="MWTADEIAQLCYEHYGIRLPKKGKPEPNHEWTLLAAVVKIQSPA
DKACDTPDKPVQVTKEVVSMGTGTKCIGQSKMRKNGDILNDSHAEVIARRSFQRYLLH
QLQLAATLKEDSIFVPGTQKGVWKLRRDLIFVFFSSHTPCGDASIIPMLEFEDQPCCP
VFRNWAHNSSVEASSNLEAPGNERKCEDPDSPVTKKMRLEPGTAAREVTNGAAHHQSF
GKQKSGPISPGIHSCDLTVEGLATVTRIAPGSAKVIDVYRTGAKCVPGEAGDSGKPGA
AFHQVGLLRVKPGRGDRTRSMSCSDKMARWNVLGCQGALLMHLLEEPIYLSAVVIGKC
PYSQEAMQRALIGRCQNVSALPKGFGVQELKILQSDLLFEQSRSAVQAKRADSPGRLV
PCGAAISWSAVPEQPLDVTANGFPQGTTKKTIGSLQARSQISKVELFRSFQKLLSRIA
RDKWPHSLRVQKLDTYQEYKEAASSYQEAWSTLRKQVFGSWIRNPPDYHQFK"
BASE COUNT 549 a 437 c 484 g 408 t
ORIGIN
1 agctcgcttt cttctaggcg cgtttcctga aggtcgatgg ccaggtggtc ttcataaact
61 atactgcctt gtgatgcctc cctagaaatg agaggtctca ataccagctc agaccatgtg
121 gaccgcggat gagattgctc agctatgcta tgaacactat gggatcaggc tgcccaagaa
181 ggggaagcct gagccaaacc atgagtggac attattggca gcggtggtga agatacaatc
241 tccagctgac aaggcctgcg acacccctga taagccggtg caagtgacaa aggaagttgt
301 gtcaatggga acaggaacaa aatgcatagg acagtccaaa atgaggaaga acggagacat
361 cctcaatgat agccatgctg aggtcatagc cagaaggagt ttccaaaggt accttctcca
421 ccaactccag ttggcagcca ccctgaaaga ggatagcatc tttgtcccag gaactcaaaa
481 aggagtgtgg aaacttagac gagacctcat ttttgtgttt ttctccagcc atacaccctg
541 tggggatgcc tccatcattc cgatgcttga gtttgaagat cagccttgct gtcctgtctt
601 cagaaattgg gcccacaact catcagtaga agccagtagt aacctggaag ctcctggaaa
661 tgaaagaaaa tgtgaagacc ctgacagtcc tgtaaccaaa aagatgaggc ttgagcctgg
721 gactgcagcc agggaggtca ccaacggagc agctcaccat cagagttttg gcaagcagaa
781 aagtggccca atctcaccag gcatccacag ctgtgatctc actgtagagg gactggctac
841 tgtcaccaga atagcccctg gtagtgccaa agtgatagac gtttatagaa ctggagccaa
901 gtgtgtacct ggagaagctg gagactccgg aaagccgggt gctgcgtttc accaggtggg
961 gctgctccga gtgaagccag gccgtggaga cagaacacgc tccatgtcct gtagtgacaa
1021 gatggcccga tggaacgtcc tcggatgcca aggggcactg ttgatgcact tgctggaaga
1081 gcccatctac ctgtcagctg tggtcattgg gaagtgccca tacagccagg aagccatgca
1141 gagagcactg attggaaggt gtcagaatgt gtctgcttta ccaaaaggct tcggagttca
1201 agaattaaaa atactgcagt cagatttact atttgaacag agccgcagtg cggtgcaggc
1261 aaaaagggct gatagcccag gtcgacttgt tccttgtggg gcagccatca gctggagtgc
1321 agttcctgag cagcctttgg atgttactgc caatggcttt ccacagggaa caacaaagaa
1381 aacaattgga agccttcagg caagatccca aatcagcaaa gtggaactct tcagatcatt
1441 ccagaagctg ctaagcagaa ttgcaaggga caagtggcca cactccctca gggtgcagaa
1501 gctggatacc taccaggagt acaaggaggc tgcgtcctct taccaggaag cctggagcac
1561 actccggaag caggtgtttg gatcctggat cagaaaccca ccggattatc accagttcaa
1621 gtgagaagga aatgtttgct ctggtagcag gacccttcat cctgaactgc cttcctccac
1681 gcaggacaag tcttagcttt tttggtagtt aaatcaggga acattctttc tgagctttgc
1741 atctctgttg tgtaatacag atggaatctg gaacttagag caagctatac ttgattgaag
1801 tagctctctg ctaaaatggc atctcactaa tgacctcaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaa
//