LOCUS BC002714 1115 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glycerophosphodiester phosphodiesterase domain
containing 3, mRNA (cDNA clone MGC:4171 IMAGE:3629566), complete
cds.
ACCESSION BC002714
VERSION BC002714.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1115)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1115)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC002714.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: c Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13236539.
FEATURES Location/Qualifiers
source 1..1115
/db_xref="H-InvDB:HIT000031122"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4171 IMAGE:3629566"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1115
/gene="GDPD3"
/gene_synonym="FLJ22603"
/gene_synonym="MGC4171"
/db_xref="GeneID:79153"
/db_xref="HGNC:HGNC:28638"
CDS 254..1036
/gene="GDPD3"
/gene_synonym="FLJ22603"
/gene_synonym="MGC4171"
/codon_start=1
/product="glycerophosphodiester phosphodiesterase domain
containing 3"
/protein_id="AAH02714.2"
/db_xref="GeneID:79153"
/db_xref="HGNC:HGNC:28638"
/translation="MENSMAQRSDLLELDCQLTRDRVVVVSHDENLCRQSGLNRDVGS
LDFEDLPLYKEKLEVYFSPGHFAHGSDRRMVRLEDLFQRFPRTPMSVEIKGKNEELIR
EIAGLVRRYDRNEITIWASEKSSVMKKCKAANPEMPLSFTISRGFWVLLSYYLGLLPF
IPIPEKFFFCFLPNIINRTYFPFSCSCLNQLLAVVSKWLIMRKSLIRHLEERGVQVVF
WCLNEESDFEAAFSVGATGVITDYPTALRHYLDNHGPAARTS"
BASE COUNT 246 a 317 c 306 g 246 t
ORIGIN
1 cccacactgg ctaggcaggc agcacagtcc cgcggacggc tgagcgtgtg gctgcaggag
61 cttctgtggg agtacggtca tgagcctttt gctgtactat gccctccctg ccctgggcag
121 ctatgccatg ctctccatct tcttcctgcg ccggcctcat ctgctgcaca cgcccagggc
181 tcccaccttc cgcatccgcc tgggggccca ccgaggagga tctggagagc tgctggagaa
241 caccatggag gccatggaga actccatggc ccagcgctcg gacctcctgg agctcgactg
301 tcagctgaca cgggacagag tggtggtggt gtcacatgat gagaacctgt gccgccagtc
361 gggcctaaac agggatgtgg gcagcctgga cttcgaggac ctgcccctct acaaggagaa
421 gctggaggtt tacttctctc caggccactt tgctcacggg tcagaccggc gcatggttcg
481 tctggaggac ctgttccaga ggtttccaag gacacccatg agcgtagaga tcaaagggaa
541 gaacgaagag ctcatccgtg agatagcagg cttggtgaga cgctatgacc gtaatgaaat
601 caccatctgg gcctcggaga agagctcggt catgaagaaa tgcaaggctg ccaaccccga
661 gatgcccctg tccttcacaa taagccgagg attctgggtg ctgctttcct actacctggg
721 gctgctgccc ttcatcccaa tccctgagaa gttcttcttc tgcttcctgc ccaacatcat
781 caacaggacc tatttcccat tttcctgctc ttgcctgaac cagttattgg ctgtggtttc
841 gaaatggctg atcatgagga agagtctgat ccgacacttg gaggagcgag gggtgcaggt
901 ggtcttttgg tgccttaatg aagagtcgga ttttgaagca gccttcagcg tgggagccac
961 tggcgtcata acggattatc ccacagccct gcggcactac ctggacaacc atggaccagc
1021 tgcccggacc tcctaagtcc agaagcctcg aggtctcctg tttctcttcc tgaaaaataa
1081 atatttgcct ttcgatcaaa aaaaaaaaaa aaaaa
//