LOCUS BC002711 950 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cell division cycle 42 (GTP binding protein, 25kDa),
mRNA (cDNA clone MGC:3497 IMAGE:3626647), complete cds.
ACCESSION BC002711
VERSION BC002711.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 950)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 950)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC002711.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: c Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16357470.
FEATURES Location/Qualifiers
source 1..950
/db_xref="H-InvDB:HIT000031119"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3497 IMAGE:3626647"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..950
/gene="CDC42"
/gene_synonym="CDC42Hs"
/gene_synonym="G25K"
/db_xref="GeneID:998"
/db_xref="HGNC:HGNC:1736"
/db_xref="MIM:116952"
CDS 105..680
/gene="CDC42"
/gene_synonym="CDC42Hs"
/gene_synonym="G25K"
/codon_start=1
/product="cell division cycle 42 (GTP binding protein,
25kDa)"
/protein_id="AAH02711.1"
/db_xref="GeneID:998"
/db_xref="HGNC:HGNC:1736"
/db_xref="MIM:116952"
/translation="MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV
MIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT
HHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSAL
TQKGLKNVFDEAILAALEPPEPKKSRRCVLL"
BASE COUNT 288 a 205 c 200 g 257 t
ORIGIN
1 ggcagccgag gagaccccgc gcagtgctgc caacgccccg gtggagaagc tgaggtcatc
61 atcagatttg aaatatttaa agtggataca aaactatttc agcaatgcag acaattaagt
121 gtgttgttgt gggcgatggt gctgttggta aaacatgtct cctgatatcc tacacaacaa
181 acaaatttcc atcggaatat gtaccgactg tttttgacaa ctatgcagtc acagttatga
241 ttggtggaga accatatact cttggacttt ttgatactgc agggcaagag gattatgaca
301 gattacgacc gctgagttat ccacaaacag atgtatttct agtctgtttt tcagtggtct
361 ctccatcttc atttgaaaac gtgaaagaaa agtgggtgcc tgagataact caccactgtc
421 caaagactcc tttcttgctt gttgggactc aaattgatct cagagatgac ccctctacta
481 ttgagaaact tgccaagaac aaacagaagc ctatcactcc agagactgct gaaaagctgg
541 cccgtgacct gaaggctgtc aagtatgtgg agtgttctgc acttacacag aaaggcctaa
601 agaatgtatt tgacgaagca atattggctg ccctggagcc tccagaaccg aagaagagcc
661 gcaggtgtgt gctgctatga acatctctcc agagcccttt ctgcacagct ggtgtcggca
721 tcatactaaa agcaatgttt aaatcaaact aaagattaaa aattaaaatt cgtttttgca
781 ataatgacaa atgccctgca cctacccaca tgcactcgtg tgagacaagg cccataggta
841 tggccccccc cttccccctc ccagtactag ttaattttga gtaattgtat tgtcagaaaa
901 gtgattagta ctattttttt tttgttgttt caaaaaaaaa aaaaaaaaaa
//