LOCUS BC002698 772 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens coiled-coil domain containing 56, mRNA (cDNA clone
MGC:3372 IMAGE:3609536), complete cds.
ACCESSION BC002698
VERSION BC002698.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 772)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 772)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC002698.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: o Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..772
/db_xref="H-InvDB:HIT000031107"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3372 IMAGE:3609536"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..772
/gene="CCDC56"
/gene_synonym="HSPC009"
/db_xref="GeneID:28958"
/db_xref="HGNC:HGNC:24990"
CDS 6..326
/gene="CCDC56"
/gene_synonym="HSPC009"
/codon_start=1
/product="coiled-coil domain containing 56"
/protein_id="AAH02698.1"
/db_xref="GeneID:28958"
/db_xref="HGNC:HGNC:24990"
/translation="MASSGAGDPLDSKRGEAPFAQRIDPTREKLTPEQLHSMRQAELA
QWQKVLPRRRTRNIVTGLGIGALVLAIYGYTFYSISQERFLDELEDEAKAARARALAR
ASGS"
BASE COUNT 183 a 197 c 204 g 188 t
ORIGIN
1 gcaacatggc gtcttcggga gctggtgacc ctctggattc taagcgtgga gaggccccgt
61 tcgctcagcg tatcgacccg actcgggaga agctgacacc cgagcaactg cattccatgc
121 ggcaggcgga gcttgcccag tggcagaagg tcctaccacg gcggcgaacc cggaacatcg
181 tgaccggcct aggcatcggg gccctggtgt tggctattta tggttacacc ttctactcga
241 tttcccagga gcgtttccta gatgagctag aagacgaggc caaagctgcc cgagcccgag
301 ctctggcaag ggcgtcaggg tcctaatctg gatgggtatt gatcatgtcc aacctgctgg
361 agccccttca catggtggat gatgccccat gaccctgtag aaattgaatc ctgctcacaa
421 cattgttggc cttcttacta accttggacc gtgattgagc ccaagaaacc agggacttac
481 gcatttggcc aatgtcaaaa gaacagaact ttgcccactg cacacttgct gtgtacaatg
541 actgagccct ttcttgtagt ttgtttcctt gtttgagagg tgtgcatgcg accgtggctt
601 ttcccaaagt ttctgacttt gtggtttacc cccttcacct tccagggacg cagttgttac
661 gaggttagac gtggcagctc tgtgcagtgt ttgagcctac agtgggatac atagggtcaa
721 attgagaata ataaactgag tcattctcct ggaaaaaaaa aaaaaaaaaa aa
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