LOCUS BC002661 1716 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens keratin 13, mRNA (cDNA clone MGC:3781 IMAGE:3610361),
complete cds.
ACCESSION BC002661
VERSION BC002661.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1716)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1716)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 31, 2003 this sequence version replaced BC002661.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: g Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24234693.
FEATURES Location/Qualifiers
source 1..1716
/db_xref="H-InvDB:HIT000031075"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3781 IMAGE:3610361"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1716
/gene="KRT13"
/gene_synonym="CK13"
/gene_synonym="K13"
/db_xref="GeneID:3860"
/db_xref="HGNC:HGNC:6415"
/db_xref="MIM:148065"
CDS 48..1424
/gene="KRT13"
/gene_synonym="CK13"
/gene_synonym="K13"
/codon_start=1
/product="keratin 13"
/protein_id="AAH02661.3"
/db_xref="GeneID:3860"
/db_xref="HGNC:HGNC:6415"
/db_xref="MIM:148065"
/translation="MSLRLQSSSASYGGGFGGGSCQLGGGRGVSTCSTRFVSGGSAGG
YGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDGGLLTG
NEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQSPASPERDYSPYYKTIE
ELRDKILTATIENNRVILEIDNARLAVDDFRLKYENELALRQSVEADINGLRRVLDEL
TLSKTDLEMQIESLNEELAYMKKNHEEEMKEFSNQVVGQVNVEMDATPGIDLTRVLAE
MREQYEAMAERNRRDAEEWFHAKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIE
LQSQLSMKAGLENTVAETECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLL
DIKTRLEQEIATYRSLLEGQDAKMIGFPSSAGSVSPRSTSVTTTSSASVTTTSNASGR
RTSDVRRP"
BASE COUNT 380 a 465 c 521 g 350 t
ORIGIN
1 ggccaagcaa gcttctatct gcacctgctc tcaatcctgc tctcaccatg agcctccgcc
61 tgcagagctc ctctgccagc tatggaggtg gtttcggggg tggctcttgc cagctgggag
121 gaggccgtgg tgtctctacc tgttcaactc ggtttgtgtc tgggggatca gctgggggct
181 atggaggcgg cgtgagctgt ggttttggtg gaggggctgg tagtggcttt ggaggtggct
241 atggaggtgg ccttggaggt ggctatggag gtggccttgg aggtggcttt ggtgggggtt
301 ttgctggtgg ctttgttgac tttggtgctt gtgatggcgg cctcctcact ggcaatgaga
361 agatcaccat gcagaacctc aacgaccgcc tggcttccta cctggagaag gtgcgcgccc
421 tggaggaggc caacgctgac ctggaggtga agatccgtga ctggcacctg aagcagagcc
481 cagctagccc tgagcgggac tacagcccct actacaagac cattgaagag ctccgggaca
541 agatcctgac cgccaccatt gaaaacaacc gggtcatcct ggagattgac aatgccaggc
601 tggctgtgga cgacttcagg ctcaagtatg agaatgagct ggccctgcgc cagagcgtgg
661 aggccgacat caacggcctg cgccgggtgc tggatgagct cactctgtct aagactgacc
721 tggagatgca gatcgagagc ctgaatgaag agctagccta catgaagaag aaccatgaag
781 aggagatgaa ggaatttagc aaccaggtgg tcggccaggt caacgtggag atggatgcca
841 ccccaggcat tgacctgacc cgcgtgctgg cagagatgag ggagcagtac gaggccatgg
901 cagagaggaa ccgccgggat gctgaggaat ggttccacgc caagagtgca gagctgaaca
961 aggaggtgtc taccaacact gccatgattc agaccagcaa gacagagatc acggagctca
1021 ggcgcacgct ccaaggcctg gagattgagc tgcagtccca gctgagcatg aaagcggggc
1081 tggagaacac ggtggcagag acggagtgcc gctatgccct gcagctgcag cagatccagg
1141 gactcatcag cagcatcgag gcccagctga gcgagctccg cagtgagatg gagtgccaga
1201 accaagagta caagatgctg ctggacatca agacacgtct ggagcaggag atcgccacct
1261 accgcagcct gctcgagggc caggacgcca agatgattgg tttcccttcc tcagcaggaa
1321 gcgtcagccc ccgtagcacc tctgttacca cgacttctag tgcctctgtt accaccacct
1381 ctaatgcctc tggtcgccgc acttctgatg tccgtaggcc ttaaatctgc ctggcgtccc
1441 ctccctctgt cttcagcacc cagaggagga gagagccggc agttccctgc aggagagagg
1501 aggggctgct ggacccaagg ctcagtccct ctgctctcag gaccccctgt cctgactctc
1561 tcctgatggt gggccctctg tgctcttctc ttcctgtcgg atctctctcc tctctgacct
1621 ggatacgctt tggtttctca acttctctac cccaaagaaa agattattca ataaagtttc
1681 ctgcctttct gcaaacataa aaaaaaaaaa aaaaaa
//