LOCUS BC002590 1225 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens interferon (alpha, beta and omega) receptor 1, mRNA
(cDNA clone IMAGE:3140704), partial cds.
ACCESSION BC002590
VERSION BC002590.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1225)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1225)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002590.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: h Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10835182.
FEATURES Location/Qualifiers
source 1..1225
/db_xref="H-InvDB:HIT000086142"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3140704"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1225
/gene="IFNAR1"
/gene_synonym="AVP"
/gene_synonym="IFNAR"
/gene_synonym="IFNBR"
/gene_synonym="IFRC"
/db_xref="GeneID:3454"
/db_xref="MIM:107450"
CDS 63..>1225
/gene="IFNAR1"
/gene_synonym="AVP"
/gene_synonym="IFNAR"
/gene_synonym="IFNBR"
/gene_synonym="IFRC"
/codon_start=1
/product="IFNAR1 protein"
/protein_id="AAH02590.1"
/db_xref="GeneID:3454"
/db_xref="MIM:107450"
/translation="MMVVLLGATTLVLVAVAPWVLSAAAGGKNLKSPQKVEVDIIDDN
FILRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKL
RIRAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDG
LSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPV
HCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYK
WKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLP
PVFNIRSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKKKKK"
BASE COUNT 405 a 232 c 247 g 341 t
ORIGIN
1 gcggctgaga ggagctgcgc gtgcgcgaac atgtaactgg tgggatctgc ggcggctccc
61 agatgatggt cgtcctcctg ggcgcgacga ccctagtgct cgtcgccgtg gcgccatggg
121 tgttgtccgc agccgcaggt ggaaaaaatc taaaatctcc tcaaaaagta gaggtcgaca
181 tcatagatga caactttatc ctgaggtgga acaggagcga tgagtctgtc gggaatgtga
241 ctttttcatt cgattatcaa aaaactggga tggataattg gataaaattg tctgggtgtc
301 agaatattac tagtaccaaa tgcaactttt cttcactcaa gctgaatgtt tatgaagaaa
361 ttaaattgcg tataagagca gaaaaagaaa acacttcttc atggtatgag gttgactcat
421 ttacaccatt tcgcaaagct cagattggtc ctccagaagt acatttagaa gctgaagata
481 aggcaatagt gatacacatc tctcctggaa caaaagatag tgttatgtgg gctttggatg
541 gtttaagctt tacatatagc ttagttatct ggaaaaactc ttcaggtgta gaagaaagga
601 ttgaaaatat ttattccaga cataaaattt ataaactctc accagagact acttattgtc
661 taaaagttaa agcagcacta cttacgtcat ggaaaattgg tgtctatagt ccagtacatt
721 gtataaagac cacagttgaa aatgaactac ctccaccaga aaatatagaa gtcagtgtcc
781 aaaatcagaa ctatgttctt aaatgggatt atacatatgc aaacatgacc tttcaagttc
841 agtggctcca cgccttttta aaaaggaatc ctggaaacca tttgtataaa tggaaacaaa
901 tacctgactg tgaaaatgtc aaaactaccc agtgtgtctt tcctcaaaac gttttccaaa
961 aaggaattta ccttctccgc gtacaagcat ctgatggaaa taacacatct ttttggtctg
1021 aagagataaa gtttgatact gaaatacaag ctttcctact tcctccagtc tttaacatta
1081 gatcccttag tgattcattc catatctata tcggtgctcc aaaacagtct ggaaacacgc
1141 ctgtgatcca ggattatcca ctgatttatg aaattatttt ttgggaaaac acttcaaatg
1201 ctgagagaaa aaaaaaaaaa aaaaa
//