LOCUS BC002585 1700 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB7, member RAS oncogene family-like 1, mRNA (cDNA
clone MGC:1653 IMAGE:3140744), complete cds.
ACCESSION BC002585
VERSION BC002585.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1700)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1700)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002585.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506374.
FEATURES Location/Qualifiers
source 1..1700
/db_xref="H-InvDB:HIT000031013"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1653 IMAGE:3140744"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1700
/gene="RAB7L1"
/db_xref="GeneID:8934"
/db_xref="HGNC:HGNC:9789"
/db_xref="MIM:603949"
CDS 174..785
/gene="RAB7L1"
/codon_start=1
/product="RAB7, member RAS oncogene family-like 1"
/protein_id="AAH02585.1"
/db_xref="GeneID:8934"
/db_xref="HGNC:HGNC:9789"
/db_xref="MIM:603949"
/translation="MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDF
ALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRW
KQDLDSKLTLPNGEPVPCLLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENK
NINEAMRVLIEKMMRNSTEDIMSLSTQGDYINLQTKSSSWSCC"
BASE COUNT 439 a 404 c 418 g 439 t
ORIGIN
1 gtctagggaa tcgaggtgcc ggctgctcct tcctcacaat ttgcccagac aggcggtggg
61 tgggaatgcc tcacttcagt ttgaagaggg tccggatcca aaggggttaa aacgagcgac
121 ccccgatccc cgaccacact tcccgcctcc ctaaaacgca caccccgcta gccatgggca
181 gccgcgacca cctgttcaaa gtgctggtgg tgggggacgc cgcagtgggc aagacgtcgc
241 tggtgcagcg atattcccag gacagcttca gcaaacacta caagtccacg gtgggagtgg
301 attttgctct gaaggttctc cagtggtctg actacgagat agtgcggctt cagctgtggg
361 atattgcagg gcaggagcgc ttcacctcta tgacacgatt gtattatcgg gatgcctctg
421 cctgtgttat tatgtttgac gttaccaatg ccactacctt cagcaacagc cagaggtgga
481 aacaggacct agacagcaag ctcacactac ccaatggaga gccggtgccc tgcctgctct
541 tggccaacaa gtgtgatctg tccccttggg cagtgagccg ggaccagatt gaccggttca
601 gtaaagagaa cggtttcaca ggttggacag aaacatcagt caaggagaac aaaaatatta
661 atgaggctat gagagtcctc attgaaaaga tgatgagaaa ttccacagaa gatatcatgt
721 ctttgtccac ccaaggggac tacatcaatc tacaaaccaa gtcctccagc tggtcctgct
781 gctagtagtg tttggcttat tttccatccc agttctggga ggtcttttaa gtctcttccc
841 tttggttgcc cacctgacca ttttattaag tacatttgaa ttgtctcctg actactgtcc
901 agtaaggagg cccattgtca cttagaaaag acacctggaa cccatgtgca tttctgcatc
961 tcctggatta gcctttcaca tgttgctggc tcacattagt gccagttagt gccttcggtg
1021 taagatcttc tcatcagccc tcaatttgtg atccggaatt ttgtgagaag gattagaaat
1081 cagcacctgc gttttagaga tcataattct cacctacttc tgagcttatt tttccatttg
1141 atattcattg atatcatgac ttccaattga gaggaaaatg agatcaaatg tcatttccca
1201 aatttcttgt aggccgttgt ttcagattct ttctgtcttg gaatgtaaac atctgattct
1261 ggaatgcaga aggaggggtc tgggcatctg tggatttttg gctactagaa gtgtcccaga
1321 agtcactgta tttttgaaac ttctaacgtc ataattaagt ttctcttctt ggcatcaaga
1381 atagtcaagt tttttggccg ggcatggtgg ctcatgcctg taatcccagc acttggggag
1441 gccaaggcag gcggatcaca tgaggccagg aattcgagac caacctggtc agcatggcaa
1501 aaccccgtct ctactaaaag tacaaaaatt agccaggcgt gatggcacgt gtctgtaatc
1561 ccagctactc tggagactga ggtgggagaa tcgcttgaga ctgggaggca gaggttgcag
1621 tgaaccgaga tcatgccacc gcacttcagc ctgggtgaca gagaaggact ccgtctcaaa
1681 aaaaaaaaaa aaaaaaaaaa
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