LOCUS BC002579 1843 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glutaryl-Coenzyme A dehydrogenase, mRNA (cDNA clone
MGC:1743 IMAGE:3142978), complete cds.
ACCESSION BC002579
VERSION BC002579.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1843)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1843)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002579.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50959149.
FEATURES Location/Qualifiers
source 1..1843
/db_xref="H-InvDB:HIT000031007"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1743 IMAGE:3142978"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1843
/gene="GCDH"
/gene_synonym="ACAD5"
/gene_synonym="GCD"
/db_xref="GeneID:2639"
/db_xref="HGNC:HGNC:4189"
/db_xref="MIM:608801"
CDS 62..1378
/gene="GCDH"
/gene_synonym="ACAD5"
/gene_synonym="GCD"
/codon_start=1
/product="glutaryl-Coenzyme A dehydrogenase"
/protein_id="AAH02579.1"
/db_xref="GeneID:2639"
/db_xref="HGNC:HGNC:4189"
/db_xref="MIM:608801"
/translation="MALRGVSVRLLSRGPGLHVLRTWVSSAAQTEKGGRTQSQLAKSS
RPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGE
LGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQ
RQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPM
ADLFVVWARCEDGCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENV
LPGASSLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQK
KLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGN
GISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAFTASK"
BASE COUNT 419 a 502 c 563 g 359 t
ORIGIN
1 cggcagtgaa ccgggaggta ctaccaggtc gccgtcgttg ctccgctcgc tctgagagag
61 catggccctg agaggcgtct ccgtgcggct gctgagccgc ggacccggcc tgcacgtcct
121 tcgcacgtgg gtctcgtcgg cggcgcagac cgagaaaggc gggagaacac agagccaact
181 ggctaagtcc tcgcgtcccg agtttgactg gcaggacccg ctggtgctgg aggagcagct
241 gaccacagat gagatcctca tcagggacac cttccgcacc tactgccagg agagactcat
301 gcctcgcatc ctgttggcca atcgcaacga agtttttcat cgggagatca tttcggagat
361 gggggagttg ggtgtgctgg gccccaccat caaaggatat ggctgtgctg gggtttcgtc
421 tgtggcctat gggctcctgg cccgagagct ggagcgggtg gacagtggct acaggtcggc
481 gatgagtgtc cagtcctccc tcgtcatgca ccctatctat gcctatggca gcgaggaaca
541 gcggcagaag tacctgcccc agctggccaa gggggagctc ctgggctgct tcgggctcac
601 agagcccaac agcggaagtg accccagcag catggagacc agagcccact acaactcatc
661 caacaagagc tacaccctca atgggaccaa gacctggatc acgaactcgc ctatggccga
721 tctgtttgta gtgtgggctc ggtgtgaaga tggctgcatt cggggcttcc tgctggagaa
781 ggggatgcgg ggtctctcgg cccccaggat ccagggcaag ttctcgctgc gggcctcagc
841 cacaggcatg atcatcatgg acggtgtgga ggtgccagag gagaatgtgc tccctggtgc
901 atccagcctg gggggtccct tcggctgcct gaacaacgcc cggtacggca tcgcgtgggg
961 cgtgcttgga gcttcggagt tctgcttgca cacagcccgg cagtacgccc tcgacaggat
1021 gcagtttggt gtcccactgg ccaggaacca gctgattcag aagaagctgg cagacatgct
1081 cactgagatt accctgggcc ttcacgcctg cctgcagctc ggccgcttga aggaccagga
1141 caaggctgcc cccgagatgg tttctctgct gaagaggaat aactgtggga aagccctgga
1201 catcgcccgc caggcccgag acatgctggg ggggaatggg atttctgacg agtatcacgt
1261 gatccggcac gccatgaacc tggaggccgt gaacacctac gaaggtacac atgacattca
1321 cgccctgatc cttgggagag ctatcacggg aatccaggcg ttcacggcca gcaagtgagc
1381 cgctccatca ggggcccgaa actctcaagc ccctttctgg agagatgcct ggctggaccg
1441 taggagcgct gtgctctgag cttagaaagg gaggtggcgg atggggtggg aagtgagaga
1501 cactgatttt taaatatcaa aatttccctt ctgaagtcgt tcggatgtgt tccttaaaaa
1561 gaagatggaa ttctctgtag agcgtctcaa tccactttta accatggatg agagcagact
1621 ccatttaccc tgaaatagca gcttctcttg agaggagagt gacatggaag caactccgtc
1681 tgctgcagct gaccccctca cactgagttc acagtgcgcc ctccctccct cccatctggg
1741 ggtagtgcct tatgctgggt gttggagcag agtgagggag aggaaaataa agacctgcac
1801 atctgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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