LOCUS BC002488 1656 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone
MGC:1357 IMAGE:3051198), complete cds.
ACCESSION BC002488
VERSION BC002488.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1656)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1656)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002488.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66346684.
FEATURES Location/Qualifiers
source 1..1656
/db_xref="H-InvDB:HIT000030934"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1357 IMAGE:3051198"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1656
/gene="SERBP1"
/gene_synonym="CGI-55"
/gene_synonym="CHD3IP"
/gene_synonym="DKFZp564M2423"
/gene_synonym="HABP4L"
/gene_synonym="PAI-RBP1"
/gene_synonym="PAIRBP1"
/db_xref="GeneID:26135"
/db_xref="HGNC:HGNC:17860"
/db_xref="MIM:607378"
CDS 68..1276
/gene="SERBP1"
/gene_synonym="CGI-55"
/gene_synonym="CHD3IP"
/gene_synonym="DKFZp564M2423"
/gene_synonym="HABP4L"
/gene_synonym="PAI-RBP1"
/gene_synonym="PAIRBP1"
/codon_start=1
/product="SERPINE1 mRNA binding protein 1"
/protein_id="AAH02488.1"
/db_xref="GeneID:26135"
/db_xref="HGNC:HGNC:17860"
/db_xref="MIM:607378"
/translation="MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGG
GVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALK
KEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDR
PIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSGLKHEDKRGGSGSHNW
GTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKE
EGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAHAEDSVM
DHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGCGRGGRPNRGSRTDKSSASAPDV
DDPEAFPALA"
BASE COUNT 533 a 330 c 453 g 340 t
ORIGIN
1 agcaggcgct cttggctcgg cgcggcccgc tgcaatccgt ggaggaacgc gccgccgagc
61 caccatcatg cctgggcact tacaggaagg cttcggctgc gtggtcacca accgattcga
121 ccagttattt gacgacgaat cggacccctt cgaggtgctg aaggcagcag agaacaagaa
181 aaaagaagcc ggcgggggcg gcgttggggg ccctggggcc aagagcgcag ctcaggccgc
241 ggcccagacc aactccaacg cggcaggcaa acagctgcgc aaggagtccc agaaagaccg
301 caagaacccg ctgcccccca gcgttggcgt ggttgacaag aaagaggaga cgcagccgcc
361 cgtggcgctt aagaaagaag gaataagacg agttggaaga agacctgatc aacaacttca
421 gggtgaaggg aaaataattg atagaagacc agaaaggcga ccacctcgtg aacgaagatt
481 cgaaaagcca cttgaagaaa agggtgaagg aggcgaattt tcagttgata gaccgattat
541 tgaccgacct attcgaggtc gtggtggtct tggaagaggt cgagggggcc gtggacgtgg
601 aatgggccga ggagatggat ttgattctcg tggcaaacgt gaatttgata ggcatagtgg
661 aagtgataga tctggcctga agcacgagga caaacgtgga ggtagcggat ctcacaactg
721 gggaactgtc aaagacgaat taacagagtc ccccaaatac attcagaaac aaatatctta
781 taattacagt gacttggatc aatcaaatgt gactgaggaa acacctgaag gtgaagaaca
841 tcatccagtg gcagacactg aaaataagga gaatgaagtt gaagaggtaa aagaggaggg
901 tccaaaagag atgactttgg atgagtggaa ggctattcaa aataaggacc gggcaaaagt
961 agaatttaat atccgaaaac caaatgaagg tgctgatggg cagtggaaga agggatttgt
1021 tcttcataaa tcaaagagtg aagaggctca tgctgaagat tcggttatgg accatcattt
1081 ccggaagcca gcaaatgata taacgtctca gctggagatc aattttggag accttggccg
1141 cccaggacgt ggcggcaggg gaggacgagg tggatgtggg cgtggtgggc gcccaaaccg
1201 tggcagcagg accgacaagt caagtgcttc tgctcctgat gtggatgacc cagaggcatt
1261 cccagctctg gcttaactgg atgccataag acaaccctgg ttcctttgtg aacccttctg
1321 ttcaaagctt ttgcatgctt aaggattcca aacgactaag aaattaaaaa aaaaaaagac
1381 tgtcattcat accattcaca cctaaagact gaattttatc tgttttaaaa atgaacttct
1441 cccgctacac agaagtaaca aatatggtag tcagttttgt atttagaaat gtattggtag
1501 cagggatgtt ttcataattt tcagagatta tgcattcttc atgaatactt ttgtattgct
1561 gcttgcaaat atgcatttcc aaacttgaaa tataggtgtg aacagtgtgt accagtaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//