LOCUS BC002472 1937 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens lysophosphatidylcholine acyltransferase 2, mRNA (cDNA
clone MGC:1037 IMAGE:3347690), complete cds.
ACCESSION BC002472
VERSION BC002472.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1937)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1937)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002472.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: f Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47106078.
FEATURES Location/Qualifiers
source 1..1937
/db_xref="H-InvDB:HIT000030919"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1037 IMAGE:3347690"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1937
/gene="LPCAT2"
/gene_synonym="LysoPAFAT"
/db_xref="GeneID:54947"
/db_xref="HGNC:HGNC:26032"
/db_xref="MIM:612040"
CDS 141..1775
/gene="LPCAT2"
/gene_synonym="LysoPAFAT"
/codon_start=1
/product="lysophosphatidylcholine acyltransferase 2"
/protein_id="AAH02472.2"
/db_xref="GeneID:54947"
/db_xref="HGNC:HGNC:26032"
/db_xref="MIM:612040"
/translation="MSRCAQAAEVAATVPGAGVGNVGLRPPMVPRQASFFPPPVPNPF
VQQTQIGSARRVQIVLLGIILLPIRVLLVALILLLAWPFAAISTVCCPEKLTHPITGW
RRKITQTALKFLGRAMFFSMGFIVAVKGKIASPLEAPVFVAAPHSTFFDGIACVVAGL
PSMVSRNENAQVPLIGRLLRAVQPVLVSRVDPDSRKNTINEIIKRTTSGGEWPQILVF
PEGTCTNRSCLITFKPGAFIPGVPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQ
LFTKVEVEFMPVQVPNDEEKNDPVLFANKVRNLMAEALGIPVTDHTYEDCRLMISAGQ
LTLPMEAGLVEFTKISRKLKLDWDGVRKHLDEYASIASSSKGGRIGIEEFAKYLKLPV
SDVLRQLFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYITE
EEFSTILQASLGVPDLDVSGLFKEIAQGDSISYEEFKSFALKHPEYAKIFTTYLDLQT
CHVFSLPKEVQTTPSTASNKVSPEKHEESTSDKKDD"
BASE COUNT 538 a 418 c 450 g 531 t
ORIGIN
1 caggcgtcta agtaacttca gcgcctgcgc agaggctccc cagcgtcgcc ctaggctggg
61 actctagtag gtcttcggct cagttttggc tgcagcgccc gcgtagatcg cttcggccgg
121 gttctacgcc cggctcaact atgagccggt gcgcccaggc ggcggaagtg gcggccacag
181 tgccaggtgc cggcgtcggg aacgtggggc tgcggccgcc catggtgccc cgtcaggcgt
241 ccttcttccc gccgccggtg ccgaacccct tcgtgcagca gacgcagatc ggctccgcga
301 ggcgggtcca gattgtcctt cttgggatta tcttgcttcc aattcgtgtc ttattggttg
361 cgttaatttt attacttgca tggccatttg ctgcaatttc aacagtatgc tgtcctgaaa
421 agctgaccca cccaataact ggttggagga ggaaaattac tcaaacagct ttgaaatttc
481 tgggtcgtgc tatgttcttt tcaatgggat ttatagttgc tgtaaaagga aagattgcaa
541 gtcctttgga agcaccagtt tttgttgctg cccctcattc aacattcttt gatggaattg
601 cctgtgttgt agctgggtta ccttctatgg tatctcgaaa tgagaatgca caagtccctc
661 tgattggcag actgttacgg gctgtgcaac cagttttggt gtcccgtgta gatccggatt
721 cccgaaaaaa cacaataaat gaaataataa agcgaacaac atcaggagga gaatggcccc
781 agatactagt tttcccagaa ggtacttgta ctaatcgttc ctgtttgatt acttttaaac
841 caggagcctt cattccagga gttccagtgc agccagtcct cctcagatac ccaaacaagc
901 tggatactgt gacctggaca tggcaaggat atacattcat tcagctttgt atgcttactt
961 tctgccagct cttcacaaag gtagaagttg agtttatgcc agttcaagta ccaaatgatg
1021 aagaaaaaaa tgatcctgtc ctttttgcca ataaagtccg gaatttaatg gcagaagctc
1081 tgggaatacc agtaacagat catacctatg aagactgcag attgatgatt tcagcaggac
1141 agctaacatt gcctatggaa gctgggctgg tggaatttac taaaattagc cgaaaattga
1201 aattagattg ggatggtgtt cgtaagcatt tggatgaata tgcatctatt gcgagttcct
1261 caaaaggagg aagaattgga attgaagaat tcgccaagta tttaaagttg cctgtttcag
1321 atgtcttgag acaacttttt gcactctttg acaggaacca tgatggcagc attgacttcc
1381 gagagtatgt gattggcctg gctgtcttgt gcaacccttc caacacagag gagatcatcc
1441 aggtggcatt taagctgttt gacgttgatg aggatggcta cataacggag gaagagttct
1501 ccaccattct acaggcttcc cttggagtgc ctgaccttga tgtttctggt ctcttcaagg
1561 aaatagccca aggggactca atttcctatg aggaatttaa aagttttgcc ttaaagcatc
1621 cagaatatgc taagatattt acaacatacc tagacctcca gacgtgccat gtgttttcat
1681 taccaaaaga agtccagaca accccctcca ccgccagtaa taaagtcagc cctgaaaagc
1741 atgaagagag tacctcagac aaaaaagatg actgaaagca gtatttccaa taaggaaaac
1801 acagtagctt ttgcttgaaa ttgtaaaggc acttattgat aatactttta atgtgttggt
1861 aatgatgttt aaaattgaaa gatttttaaa ataaaaatga tagattttct tactaaaaaa
1921 aaaaaaaaaa aaaaaaa
//