LOCUS BC002355 1760 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein A1, mRNA (cDNA
clone MGC:8473 IMAGE:2821751), complete cds.
ACCESSION BC002355
VERSION BC002355.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1760)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1760)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC002355.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: g Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4504444.
FEATURES Location/Qualifiers
source 1..1760
/db_xref="H-InvDB:HIT000030822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8473 IMAGE:2821751"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1760
/gene="HNRPA1"
/gene_synonym="HNRNPA1"
/db_xref="GeneID:3178"
/db_xref="HGNC:HGNC:5031"
/db_xref="MIM:164017"
CDS 40..1002
/gene="HNRPA1"
/gene_synonym="HNRNPA1"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein A1"
/protein_id="AAH02355.1"
/db_xref="GeneID:3178"
/db_xref="HGNC:HGNC:5031"
/db_xref="MIM:164017"
/translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCV
VMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHL
TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD
KIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGR
GGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPM
KGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF"
BASE COUNT 559 a 285 c 455 g 461 t
ORIGIN
1 cgaagaagca tcgttaaagt ctctcttcac cctgccgtca tgtctaagtc agagtctcct
61 aaagagcccg aacagctgag gaagctcttc attggagggt tgagctttga aacaactgat
121 gagagcctga ggagccattt tgagcaatgg ggaacgctca cggactgtgt ggtaatgaga
181 gatccaaaca ccaagcgctc caggggcttt gggtttgtca catatgccac tgtggaggag
241 gtggatgcag ctatgaatgc aaggccacac aaggtggatg gaagagttgt ggaaccaaag
301 agagctgtct ccagagaaga ttctcaaaga ccaggtgccc acttaactgt gaaaaagata
361 tttgttggtg gcattaaaga agacactgaa gaacatcacc taagagatta ttttgaacag
421 tatggaaaaa ttgaagtgat tgaaatcatg actgaccgag gcagtggcaa gaaaaggggc
481 tttgcctttg taacctttga cgaccatgac tccgtggata agattgtcat tcagaaatac
541 catactgtga atggccacaa ctgtgaagtt agaaaagccc tgtcaaagca agagatggct
601 agtgcttcat ccagccaaag aggtcgaagt ggttctggaa actttggtgg tggtcgtgga
661 ggtggtttcg gtgggaatga caacttcggt cgtggaggaa acttcagtgg tcgtggtggc
721 tttggtggca gccgtggtgg tggtggatat ggtggcagtg gggatggcta taatggattt
781 ggtaatgatg gaagcaattt tggaggtggt ggaagctaca atgattttgg gaattacaac
841 aatcagtctt caaattttgg acccatgaag ggaggaaatt ttggaggcag aagctctggc
901 ccctatggcg gtggaggcca atactttgca aaaccacgaa accaaggtgg ctatggcggt
961 tccagcagca gcagtagcta tggcagtggc agaagatttt aattaggaaa caaagcttag
1021 caggagagga gagccagaga agtgacaggg aagctacagg ttacaacaga tttgtgaact
1081 cagccaagca cagtggtggc agggcctagc tgctacaaag aagacatgtt ttagacaaat
1141 actcatgtgt atgggcaaaa aactcgagga ctgtatttgt gactaattgt ataacaggtt
1201 attttagttt ctgttctgtg gaaagtgtaa agcattccaa caaagggttt taatgtagat
1261 tttttttttt gcaccccatg ctgttgattg ctaaatgtaa cagtctgatc gtgacgctga
1321 ataaatgtct tttttttaat gtgctgtgta aagttagtct actcttaagc catcttggta
1381 aatttcccca acagtgtgaa gttagaattc cttcagggtg atgccaggtt ctatttggaa
1441 tttatataca acctgcttgg gtggagaagc cattgtcttc ggaaaccttg gtgtagttga
1501 actgatagtt actgttgtga cctgaagttc accattaaaa gggattaccc aagcaaaatc
1561 atggaatggt tataaaagtg attgttggca catcctatgc aatatatcta aattgaataa
1621 tggtaccaga taaaattata gatgggaatg aagcttgtgt atccattatc atgtgtaatc
1681 aataaacgat ttaattctct tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa
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