LOCUS BC001958 942 bp mRNA linear HUM 27-JUL-2004
DEFINITION Homo sapiens ADP-ribosylation-like factor 6 interacting protein 4,
mRNA (cDNA clone MGC:814 IMAGE:3544177), complete cds.
ACCESSION BC001958
VERSION BC001958.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 942)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 942)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706183.
FEATURES Location/Qualifiers
source 1..942
/db_xref="H-InvDB:HIT000030784"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:814 IMAGE:3544177"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..942
/gene="ARL6IP4"
/gene_synonym="MGC814"
/gene_synonym="SR-25"
/gene_synonym="SRp25"
/db_xref="GeneID:51329"
/db_xref="MIM:607668"
CDS 32..688
/gene="ARL6IP4"
/gene_synonym="MGC814"
/gene_synonym="SR-25"
/gene_synonym="SRp25"
/codon_start=1
/product="ARL6IP4 protein"
/protein_id="AAH01958.1"
/db_xref="GeneID:51329"
/db_xref="MIM:607668"
/translation="MAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQER
SKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKL
KKKGKEKAEAQQVEALPGPSLDQWHRSAGEEEDGPVLTDEQKSRIQAMKPMTKEEWDA
RQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDCLAFQMRAGLLP
"
BASE COUNT 237 a 258 c 310 g 137 t
ORIGIN
1 cggcccgcag ggcggtcgag cccgcggcgc catggctcac gtcggctccc gcaagcgctc
61 gaggagtcgc agccggtccc ggggacgggg gtcggaaaag agaaagaaga agagcaggaa
121 agacacctcg aggaactgct cggcctccac atcccaagag agaagcaagc agaaggcccg
181 gaggagaaca agatccagct cctcctcctc ttcttccagt tcttctagct cctcttcttc
241 ctcctcgtcc tcctcctctt cctccagtga tggccggaag aagcggggga agtacaagga
301 caagaggagg aagaagaaga agaagaggaa gaagctgaag aagaagggca aggagaaggc
361 ggaagcacag caggtggagg ctctgccggg cccctcgctg gaccagtggc accgatcagc
421 tggggaggaa gaggatggcc cagtcctgac ggatgagcag aagtcccgaa tccaggccat
481 gaagcccatg accaaggagg agtgggatgc ccggcagagc atcatccgca aggtggtgga
541 ccctgagacg gggcgcacca ggcttattaa gggagatggc gaggtcctag aggaaatcgt
601 aaccaaagaa cgacacagag agatcaacaa gcaagccacc cgaggggact gcctggcctt
661 ccagatgcga gctgggttgc ttccctgagg gcccccgctg gccaaggcct gtggacgacg
721 ctggcggccc agcctgggca ggtttcaggg tgccagtggg aagcctgatg ggtgctggtg
781 gcctttcccc cgtggattgg tctctggccc agcccagtct cttctcaggg gcagggggtg
841 gaggttgggg tcaccggcct gcttggcacc cccatctgaa agagcagcac ttctcagcta
901 ttaaaggccc cctggataga aaaaaaaaaa aaaaaaaaaa aa
//