LOCUS BC001945 2228 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens histone H4 transcription factor, mRNA (cDNA clone
MGC:4317 IMAGE:2820431), complete cds.
ACCESSION BC001945
VERSION BC001945.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2228)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2228)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725943.
FEATURES Location/Qualifiers
source 1..2228
/db_xref="H-InvDB:HIT000030771"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4317 IMAGE:2820431"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2228
/gene="HINFP"
/gene_synonym="HiNF-P"
/gene_synonym="ZNF743"
/db_xref="GeneID:25988"
/db_xref="HGNC:HGNC:17850"
/db_xref="MIM:607099"
CDS 99..1652
/gene="HINFP"
/gene_synonym="HiNF-P"
/gene_synonym="ZNF743"
/codon_start=1
/product="histone H4 transcription factor"
/protein_id="AAH01945.1"
/db_xref="GeneID:25988"
/db_xref="HGNC:HGNC:17850"
/db_xref="MIM:607099"
/translation="MPPPGKVPRKENLWLQCEWGSCSFVCSTMEKFFEHVTQHLQQHL
HGSGEEEEEEEEDDPLEEEFSCLWQECGFCSLDSSADLIRHVYFHCYHTKLKQWGLQA
LQSQADLGPCILDFQSRNVIPDIPDHFLCLWEHCENSFDNPEWFYRHVEAHSLCCEYE
AVGKDNPVVLCGWKGCTCTFKDRSKLREHLRSHTQEKVVACPTCGGMFANNTKFLDHI
RRQTSLDQQHFQCSHCSKRFATERLLRDHMRNHVNHYKCPLCDMTCPLPSSLRNHMRF
RHSEDRPFKCDCCDYSCKNLIDLQKHLDTHSEEPAYRCDFENCTFSARSLCSIKSHYR
KVHEGDSEPRYKCHVCDKCFTRGNNLTVHLRKKHQFKWPSGHPRFRYKEHEDGYMRLQ
LVRYESVELTQQLLRQPQEGSGLGTSLNESSLQGIILETVPGEPGRKEEEEEGKGSEG
TALSASQDNPSSVIHVVNQTNAQGQQEIVYYVLSEAPGEPPPVPEPPSGGIMEKLQGI
AEEPEIQMV"
BASE COUNT 538 a 592 c 583 g 515 t
ORIGIN
1 caatggtgtg atcttggctc tttgcaacct ctgcctcctg ggctcaagcc ttcctcccac
61 ctgaacctcc caagtagcgg gactgcaggg tgaaggccat gccgcctcct gggaaagttc
121 cccgaaagga gaatctgtgg ctacagtgtg agtgggggtc ctgctccttt gtgtgctcaa
181 ccatggaaaa gttctttgag catgtcactc agcacctgca gcagcacctg catggctctg
241 gggaggagga ggaagaggaa gaggaggatg acccacttga ggaagaattc tcctgcttgt
301 ggcaggaatg tggcttttgt tctctggaca gttctgctga cctcatccgc catgtctact
361 tccactgcta ccacaccaag ctgaaacagt gggggctgca ggccttgcaa agccaggctg
421 accttggccc ctgcatcctg gacttccaga gccggaacgt catccctgat atccctgacc
481 acttcctgtg tctgtgggag cactgtgaga attccttcga caatcctgag tggttttatc
541 ggcatgtgga agcacacagt ctgtgctgtg aatacgaagc agtcggcaag gacaacccgg
601 tggtgctgtg tggctggaaa ggctgtacct gcaccttcaa ggaccgcagt aaacttcgag
661 agcacctccg cagccatacc caggagaaag tggtagcctg ccccacctgt gggggcatgt
721 ttgccaacaa taccaagttc ttagatcaca tccgtcgcca gacctcattg gatcagcagc
781 acttccagtg ttctcactgt tccaagagat ttgccacaga gcggctattg cgggaccaca
841 tgcgcaacca tgtgaatcac tataagtgcc ctctgtgtga catgacctgc ccgctgcctt
901 cctccctccg caaccacatg cgctttcgtc acagtgagga ccggcccttt aaatgtgact
961 gttgtgacta cagctgcaag aatcttattg acctccagaa gcacctggat acccacagcg
1021 aggagccagc ctacaggtgt gattttgaga actgcacctt cagtgcccga tccctctgct
1081 ctatcaagtc ccattaccgc aaagtacatg aaggagactc tgagccaagg tacaaatgtc
1141 atgtgtgtga caaatgcttc acacggggca acaacctcac cgtgcacctt cgcaagaagc
1201 accagttcaa gtggccctca gggcatcccc gttttcggta caaggaacat gaagatggct
1261 atatgcggct gcagctggtt cgctacgaga gtgtagagct gacacagcaa ctgctgcggc
1321 aaccacaaga gggatcgggc ctgggaacgt cgctgaacga gagcagcctg cagggcatta
1381 ttctagaaac agtgccaggg gagccaggac gtaaggaaga ggaagaggag ggcaagggta
1441 gcgaagggac agccctctca gcctctcagg acaaccccag ttctgtcatc cacgtggtga
1501 atcagaccaa tgcccaaggc cagcaagaga ttgtctacta tgtgctgtct gaagccccag
1561 gggagcctcc cccagtccct gagccacctt cagggggcat catggaaaag cttcaaggaa
1621 tagctgagga gccagagatc cagatggttt gaaggccgca gagccagacc atttcttccc
1681 caggtcctga agtttgagcc aggcaagtgg cagtgcccct agtgggcagc cgttgccaat
1741 ggatgccttt aggagtggtg ccgagagcag tgtggtccac tctggcctgg gtttgcatca
1801 ttctgcagac tctaaagact tcccttttct gccagactac attttgtggg gagcctgagg
1861 actctggatt ctttgagggg atcctggatg tgtgtgttct tgttaaagag gctgttatca
1921 ggcttaacta taaccctcaa gatctgcttg acagtgatta aatccttagc tcacatccat
1981 tcccatcttt cgggctcctt aggcccaagg atggcatgtg actggtccct gcaagggtcc
2041 tttctttgtc accagccaag gcattgataa ccaagtagcc attttcctct taaggtttcc
2101 tctacaaccc caaggacttt catgattatc ctcagggaca ggattggagg cattgagcgt
2161 gtttattaac aaattgtttt tggtaataaa ataaatgctt ggactcttaa aaaaaaaaaa
2221 aaaaaaaa
//