LOCUS BC001860 1692 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 49, mRNA (cDNA clone
MGC:4707 IMAGE:3534541), complete cds.
ACCESSION BC001860
VERSION BC001860.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1692)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1692)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001860.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: e Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51558750.
FEATURES Location/Qualifiers
source 1..1692
/db_xref="H-InvDB:HIT000030701"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4707 IMAGE:3534541"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1692
/gene="C11orf49"
/gene_synonym="FLJ22210"
/gene_synonym="MGC4707"
/db_xref="GeneID:79096"
/db_xref="HGNC:HGNC:28720"
CDS 64..1059
/gene="C11orf49"
/gene_synonym="FLJ22210"
/gene_synonym="MGC4707"
/codon_start=1
/product="chromosome 11 open reading frame 49"
/protein_id="AAH01860.1"
/db_xref="GeneID:79096"
/db_xref="HGNC:HGNC:28720"
/translation="MLSPERLALPDYEYLAQRHVLTYMEDAVCQLLENREDISQYGIA
RFFTEYFNSVCQGTHILFREFSFVQATPHNRVSFLRAFWRCFRTVGKNGDLLTMKEYH
CLLQLLCPDFPLELTQKAARIVLMDDAMDCLMSFSDFLFAFQIQFYYSEFLDSVAAIY
EDLLSGKNPNTVIVPTSSSGQHRQRPALGGAGTLEGVEASLFYQCLENLCDRHKYSCP
PPALVKEALSNVQRLTFYGFLMALSKHRGINQALGALPDKGDLMHDPAMDEELERLLA
QVPGLVNSVTASPEASCLPSRTPPRVGSPWRPLHHSRKVDGESDGSTEETDESET"
BASE COUNT 412 a 486 c 431 g 363 t
ORIGIN
1 gagacggcaa cctgggttcc ggaagccgga gagctggagc tttgaagcca ccccggtcaa
61 aggatgctga gtccggagcg cctagcccta ccggactacg agtatctggc tcagcgacat
121 gtcctcacct acatggagga tgcagtgtgc cagctgctag aaaacaggga agatattagc
181 caatatggaa ttgccaggtt cttcactgaa tattttaaca gtgtatgcca gggaacacac
241 attctctttc gagaattcag cttcgtccaa gccacccccc acaatagggt atcattttta
301 cgggccttct ggagatgctt ccgaactgtg ggcaaaaatg gcgatttgct gaccatgaaa
361 gaatatcact gtttgctgca attactgtgt cctgatttcc cgctggagct cactcagaaa
421 gcagccagga ttgtgctcat ggacgatgcc atggactgct tgatgtcttt ttcagatttc
481 ctctttgcct tccagatcca gttttactac tcagaattcc tggacagtgt ggctgccatc
541 tatgaggacc tgctgtcagg caagaacccc aacacagtga ttgtgccgac gtcgtccagt
601 gggcagcacc gccaacgacc tgccttgggc ggggccggca cgctggaggg cgtggaggcg
661 tcgctgttct accagtgtct ggaaaacctg tgtgatcggc acaagtacag ctgcccaccc
721 ccagcacttg tcaaagaggc cctcagcaat gttcagagac tgaccttcta tggattcctc
781 atggctctct caaagcaccg tggaatcaac caagccctcg gagctttgcc tgacaagggg
841 gatctgatgc acgacccagc aatggatgaa gagctggaac ggctgctggc ccaggtccca
901 ggcctggtca actcggtcac agccagtcca gaggccagtt gcctgccttc ccggacccct
961 ccccgggttg gctctccctg gagacctctc catcattccc gaaaagtgga tggagagagt
1021 gatggctcca ctgaagagac agacgagtcg gagacttgag gagtccaaag ggtcctgccc
1081 acagcgccct gtacctgctc ccacccagcc cttggtgtgc ccacccagcc tcctctccag
1141 caccttgctg tgctgccctc tgctgctgac aaggtgaata acagccccaa gaccagccag
1201 aggggctctg atgatcagcc cagccagtgg ccccggaagg tgaatggcct gctctccctg
1261 gccctatcag cctgtgaact tcacttaggc cccaagctga cagactgtgc tgaggccacc
1321 ttgtcacgcc gtagcctgtt agtcctccta acctcttaag agcagtctct tctgagccag
1381 cctctgcggg tcccccaata aggttcatct cctcacagca actccattaa gggggagaac
1441 ccgaatagcc acgcagggcc ttgcaccatc aagggtgaca cctgcgacgc aagtaccagg
1501 aggacataac cgctgtggcc tgttggagaa cagccagtag ccttggtaat atgaagggtg
1561 ggccagaaga tgatttcact tgcaaaaact gcttcaagtc ttgacccctt tgtgtctaat
1621 agctaaacaa acatgtgaaa cgaataaaaa gtccctcatg tctggtaaaa aaaaaaaaaa
1681 aaaaaaaaaa aa
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