LOCUS BC001796 1342 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens germ cell associated 1, mRNA (cDNA clone MGC:3146
IMAGE:3353821), complete cds.
ACCESSION BC001796
VERSION BC001796.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1342)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1342)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: n Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13775203.
FEATURES Location/Qualifiers
source 1..1342
/db_xref="H-InvDB:HIT000030659"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3146 IMAGE:3353821"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1342
/gene="GSG1"
/db_xref="GeneID:83445"
/db_xref="HGNC:HGNC:19716"
CDS 155..1003
/gene="GSG1"
/codon_start=1
/product="germ cell associated 1"
/protein_id="AAH01796.1"
/db_xref="GeneID:83445"
/db_xref="HGNC:HGNC:19716"
/translation="MELSKAFSGQRTLLSAILSMLSLSFSTTSLLSNYWFVGTQKVPK
PLCEKGLAAKCFDMPVSLDGDTNTSTQEVVQYNWETGDDRFSFRSFRSGMWLSCEETV
EEPGERCRSFIELTPPAKRGEKGLLEFATLQGPCHPTLRFGGKRLMEKASLPSPPLGL
CGKNPMVIPGNADHLHRTSIHQLPPATNRLATHWEPCLWAQTERLCCCFLCPVRSPGD
GGPHDVFTSLPSDCQLGSRRLETTCLELWLGLLHGLALLHLLHGVGCHHLQHVHQDGA
GVQVQA"
BASE COUNT 334 a 353 c 356 g 299 t
ORIGIN
1 caagaatatg agatagaagg ggaggggtag gaggagaggg aggagggtag gaagacagtt
61 tgcattcttg caacattaaa ccaaagggac ttggagtgca gatggcatcc ttcggttctt
121 ccagacaagc tgcaagacgc tgaccatggc caagatggag ctctcgaagg ccttctctgg
181 ccagcggaca ctcctatctg ccatcctcag catgctatca ctcagcttct ccacaacatc
241 cctgctcagc aactactggt ttgtgggcac acagaaggtg cccaagcccc tgtgcgagaa
301 aggtctggca gccaagtgct ttgacatgcc agtgtccctg gatggagata ccaacacatc
361 cacccaggag gtggtacaat acaactggga gactggggat gaccggttct ccttccggag
421 cttccggagt ggcatgtggc tatcctgtga ggaaactgtg gaagaaccag gggagaggtg
481 ccgaagtttc attgaactta caccaccagc caagagaggt gagaaaggac tactggaatt
541 tgccacgttg caaggcccat gtcaccccac tctccgattt ggagggaagc ggttgatgga
601 gaaggcttcc ctcccctccc ctcccttggg gctttgtggc aaaaatccta tggttatccc
661 tgggaacgca gatcacctac atcggacttc aattcatcag cttcctcctg ctactaacag
721 acttgctact cactgggaac cctgcctgtg ggctcaaact gagcgccttt gctgctgttt
781 cctctgtcct gtcaggtctc ctggggatgg tggcccacat gatgtattca caagtcttcc
841 aagcgactgt caacttgggt ccagaagact ggagaccaca tgtttggaat tatggctggg
901 ccttctacat ggcctggctc tccttcacct gctgcatggc gtcggctgtc accaccttca
961 acacgtacac caggatggtg ctggagttca agtgcaagca tagtaagagc ttcaaggaaa
1021 acccgaactg cctaccacat caccatcagt gtttccctcg gcggctgtca agtgcagccc
1081 ccaccgtggg tcctttgacc agctaccacc agtatcataa tcagcccatc cactctgtct
1141 ctgagggagt cgacttctac tccgagctgc ggaacaaggg atttcaaaga ggggccagcc
1201 aggagctgaa agaagcagtt aggtcatctg tagaggaaga gcagtgttag gagttaagcg
1261 ggtttgggga gtaggcttga gccctacctt acacgtctgc tgattatcaa catgtgctta
1321 agccaaaaaa aaaaaaaaaa aa
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