LOCUS BC001779 1724 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens translocase of outer mitochondrial membrane 40 homolog
(yeast), mRNA (cDNA clone MGC:1886 IMAGE:3354670), complete cds.
ACCESSION BC001779
VERSION BC001779.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1724)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1724)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: n Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5174722.
FEATURES Location/Qualifiers
source 1..1724
/db_xref="H-InvDB:HIT000030644"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1886 IMAGE:3354670"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1724
/gene="TOMM40"
/gene_synonym="C19orf1"
/gene_synonym="D19S1177E"
/gene_synonym="PER-EC1"
/gene_synonym="PEREC1"
/gene_synonym="TOM40"
/db_xref="GeneID:10452"
/db_xref="MIM:608061"
CDS 148..1233
/gene="TOMM40"
/gene_synonym="C19orf1"
/gene_synonym="D19S1177E"
/gene_synonym="PER-EC1"
/gene_synonym="PEREC1"
/gene_synonym="TOM40"
/codon_start=1
/product="TOMM40 protein"
/protein_id="AAH01779.1"
/db_xref="GeneID:10452"
/db_xref="MIM:608061"
/translation="MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSL
GAGTSTSRSSERTPGAATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVK
LTVNKGLSNHFQVNHTVALSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSL
NAQVIHQLGPGLRSKMAIQTQQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILV
AHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYH
KASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPP
LPLTLALGAFLNHRKNKFQCGFGLTIG"
BASE COUNT 341 a 557 c 540 g 286 t
ORIGIN
1 cacggggtgg gagcggagcc caggccggga gcaggcgccg ccgccagtga gaaccggggc
61 cggagccggg tgcggatttg ctggggctga gtcgggggcg cgcgggccct gacctctgcc
121 ctctgacctc tcccctagca ggcgaccatg gggaacgtgt tggctgccag ctcgccgccc
181 gcagggccgc caccgccgcc tgcgccggcc ctcgtggggc tgccgccacc tccgccctcg
241 ccgccgggct tcacgctgcc gccgctggga ggcagcctgg gcgccggcac cagtacgagt
301 cgaagttcgg aacggacccc cggggctgca accgccagcg cctcaggggc cgccgaggat
361 ggggcctgcg gctgcctgcc caacccgggc acattcgagg agtgccaccg gaagtgcaag
421 gagctgtttc ccattcagat ggagggtgtc aagctcacag tcaacaaagg gttgagtaac
481 cattttcagg tcaaccacac agtagccctc agcacaatcg gggagtccaa ctaccacttc
541 ggggtcacat atgtggggac aaagcagctg agtcccacag aggcgttccc tgtactggtg
601 ggtgacatgg acaacagtgg cagtctcaac gctcaggtca ttcaccagct gggccccggt
661 ctcaggtcca agatggccat ccagacccag cagtcgaagt ttgtgaactg gcaggtggac
721 ggggagtatc ggggctctga cttcacagca gccgtcaccc tggggaaccc agacgtcctc
781 gtgggttcag gaatcctcgt agcccactac ctccagagca tcacgccttg cctggccctg
841 ggtggagagc tggtctacca ccggcggcct ggagaggagg gcactgtcat gtctctagct
901 gggaaataca cattgaacaa ctggttggca acggtaacgt tgggccaggc gggcatgcac
961 gcaacatact accacaaagc cagtgaccag ctgcaggtgg gtgtggagtt tgaggccagc
1021 acaaggatgc aggacaccag cgtctccttc gggtaccagc tggacctgcc caaggccaac
1081 ctcctcttca aaggctctgt ggatagcaac tggatcgtgg gtgccacgct ggagaagaag
1141 ctcccacccc tgcccctgac actggccctt ggggccttcc tgaatcaccg caagaacaag
1201 tttcagtgtg gctttggcct caccatcggc tgagccctcc tggcccccgc cttccacgcc
1261 cttccgattc cacctccacc tccacctccc cctgccacag aggggagacc tgagcccccc
1321 tcccttccct ccccccttgg gggtcggggg gggacattgg aaaggaggga ccccgccacc
1381 ccagcagctg aggaggggat tctggaactg aatggcgctt cgggattctg agtagcaggg
1441 gcagcatgcc cagtgggcct ggggtcccgg gagggattcc ggaattgagg ggcacgcagg
1501 attctgagca ccaggggcag aggcggccag acaacctcag ggaggagtgt cctggcgtcc
1561 ccatcctcca aagggcctgg gcccgccccg agggggcagc gagaggagct tccccatccc
1621 cggtcagtcc accctgcccc gtccactttc ccatctcctc ggtataaatc atgtttataa
1681 gttatggaag aaccgggaca ttttacaaaa aaaaaaaaaa aaaa
//