LOCUS BC001771 1288 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens general transcription factor IIF, polypeptide 2,
30kDa, mRNA (cDNA clone MGC:1502 IMAGE:3351446), complete cds.
ACCESSION BC001771
VERSION BC001771.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1288)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1288)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758487.
FEATURES Location/Qualifiers
source 1..1288
/db_xref="H-InvDB:HIT000030639"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1502 IMAGE:3351446"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1288
/gene="GTF2F2"
/gene_synonym="BTF4"
/gene_synonym="RAP30"
/gene_synonym="TF2F2"
/gene_synonym="TFIIF"
/db_xref="GeneID:2963"
/db_xref="HGNC:HGNC:4653"
/db_xref="MIM:189969"
CDS 122..871
/gene="GTF2F2"
/gene_synonym="BTF4"
/gene_synonym="RAP30"
/gene_synonym="TF2F2"
/gene_synonym="TFIIF"
/codon_start=1
/product="general transcription factor IIF, polypeptide 2,
30kDa"
/protein_id="AAH01771.1"
/db_xref="GeneID:2963"
/db_xref="HGNC:HGNC:4653"
/db_xref="MIM:189969"
/translation="MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLR
IAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTESSSD
KLSLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQ
YNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILK
EIGVQNVKGIHKNTWELKPEYRHYQGEEKSD"
BASE COUNT 435 a 240 c 297 g 316 t
ORIGIN
1 aaggaacgcc ggctcttcgc ctctcagcgc ggcttgtcct ttgttccgga cgcccgctcc
61 tcagccctgc ggctcctggg gtcgctgctg catcccgcac gcctccaccg gctgcagacc
121 catggccgag cgcggggaac tcgacttgac cggcgccaaa cagaacacag gagtgtggct
181 agtcaaggtt cctaaatatt tgtcacagca atgggctaaa gcttctggaa gaggtgaagt
241 tgggaaactg cggattgcca agactcaagg aaggactgag gtgtcattta ctttgaatga
301 ggatcttgca aatattcatg atattggtgg aaaaccagct tcagtcagtg ctcctagaga
361 acatccattt gtcttgcaaa gtgttggagg acagacatta acagtattta ctgagagctc
421 atcagataag ctgtcattgg aaggaatagt ggtacaaaga gctgaatgcc gaccagctgc
481 cagtgaaaac tacatgcgat taaaaagatt gcaaatagaa gagtcttcca aaccagtgag
541 gctatcacaa cagctggaca aagttgtaac aaccaattac aaacctgttg ctaatcatca
601 atacaatatc gaatatgaaa ggaaaaagaa agaagacgga aagcgagctc gagctgataa
661 acaacatgtt ttagacatgc tattttcagc ctttgagaaa catcaatact ataatcttaa
721 ggacttggtg gacatcacaa aacaacctgt ggtgtacctg aaggaaatct taaaagaaat
781 tggtgttcag aatgtaaaag ggatccacaa aaacacatgg gagctgaagc cagagtacag
841 acactatcaa ggagaagaaa agagtgacta agaagactcc tagccagcat gctagtgaaa
901 cgactagcag cgatgctatg caaaaggcgc tgatactgga aggcttgaac accgtatgtt
961 aataggggtt aagtgacagt actttgattt ctctcggtaa attttttaaa cctgtaattc
1021 ttgtaaagtt tcttaactgt ttttttgagg agaaagaaca gatttattta tagacttaac
1081 ttgtattaaa ccagattatt cacagtagga ataggggttg gaggattaag agggtttttc
1141 ttaaatatta gcttttaatg tgtacaatta ggaaattttt ttaagtgagg actctctacc
1201 cttgccgtat ctaaggagct gaggtaatac agatccaagg agaattgtat agcaagaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//