LOCUS BC001727 1208 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens ankyrin repeat domain 10, mRNA (cDNA clone MGC:1076
IMAGE:3354202), complete cds.
ACCESSION BC001727
VERSION BC001727.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1208)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1208)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: b Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923103.
FEATURES Location/Qualifiers
source 1..1208
/db_xref="H-InvDB:HIT000030606"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1076 IMAGE:3354202"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1208
/gene="ANKRD10"
/gene_synonym="FLJ20093"
/db_xref="GeneID:55608"
CDS 73..735
/gene="ANKRD10"
/gene_synonym="FLJ20093"
/codon_start=1
/product="ANKRD10 protein"
/protein_id="AAH01727.1"
/db_xref="GeneID:55608"
/translation="MSAAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLATLCSLLQQ
TPHAHLASEDSFYGWTPVHWAAHFGKLECLVQLVRAGATLNVSTTRYAQTPAHIAAFG
GHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVANGAHVEFISQSSVH
SCLPGELQHGVTFDPSVLIQCLKPEKCQWPDSSRHCTNPGFPRVCPVSLEPPELSSEP
FL"
misc_feature 130..528
/gene="ANKRD10"
/gene_synonym="FLJ20093"
/note="Arp; Region: FOG: Ankyrin repeat [General function
prediction only]"
/db_xref="CDD:COG0666"
BASE COUNT 287 a 300 c 323 g 298 t
ORIGIN
1 ggcggcggct tctcgagtcc tccccgacgc gtcctctagg ccagcgagcc ccgcgctctc
61 cggtgacgga ccatgtcggc ggcgggagcg ggcgcgggcg tagaggcggg cttctccagc
121 gaggagctgc tctcgctccg tttcccgctg caccgcgcct gccgcgacgg ggacctggcc
181 acgctctgct cgctgctgca gcagacaccc cacgcccacc tggcctctga ggactccttc
241 tatggctgga cgcccgtgca ctgggccgcg catttcggca agttggagtg cttagtgcag
301 ttggtgagag cgggagccac actcaacgtc tccaccacac ggtacgcgca gacgccagcc
361 cacattgcag cctttggggg acatcctcag tgcctggtct ggctgattca agcaggagcc
421 aacattaaca aaccggattg tgagggtgaa actcccattc acaaggcagc tcgctctggg
481 agcctagaat gcatcagtgc ccttgtggcg aatggggctc acgtcgagtt tatttcacag
541 agcagtgtac attcttgtct tccaggggaa cttcaacatg gagttacttt tgatccctca
601 gttttaattc agtgtctaaa gcctgagaaa tgccagtggc ctgacagcag cagacattgc
661 acaaacccag ggtttccaag agtgtgccca gtttctcttg aacctccaga attgtcatct
721 gaaccatttc tataacaatg gcatcttaaa tgggggtcat cagaatgtat ttcctaatca
781 tattagtgtg ggaacaaatc gaaagagatg cttggaagac tcagaagact ttggagtaaa
841 gaaagctaga actgaaggtg agaccgcttt gcgggtggga agagcacact tatttttcct
901 ttctgtaata tgttttcttt ttatggctga gcgcaccttc gagatgagac cttcacttca
961 ggtggtaatg cgcctggtgg attgtgcggt gacggtggag atttctcctg tactgccact
1021 gcgaagatgg gacacttaac aaaagggaat gtgagggaaa tactgatggc ccaagtgtaa
1081 atgtctatgt ggaacttttt gagcacccat gtttacctgc cgtgaattag attttttaat
1141 ttgttgtatc tgtttgaaat atatctatta aagaaaatct gccactgtga aaaaaaaaaa
1201 aaaaaaaa
//