LOCUS BC001691 1035 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens holocytochrome c synthase (cytochrome c heme-lyase),
mRNA (cDNA clone MGC:1443 IMAGE:3030501), complete cds.
ACCESSION BC001691
VERSION BC001691.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1035)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1035)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (16-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001691.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: f Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885400.
FEATURES Location/Qualifiers
source 1..1035
/db_xref="H-InvDB:HIT000030580"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1443 IMAGE:3030501"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1035
/gene="HCCS"
/gene_synonym="CCHL"
/db_xref="GeneID:3052"
/db_xref="MIM:300056"
CDS 125..931
/gene="HCCS"
/gene_synonym="CCHL"
/codon_start=1
/product="HCCS protein"
/protein_id="AAH01691.1"
/db_xref="GeneID:3052"
/db_xref="MIM:300056"
/translation="MGLSPSAPAVAVQASNASASPPSGCPMHEGKMKGCPVNTEPSGP
TCEKKTYSVPAHQERAYEYVECPIRGTAAENKENLDPSNLMPPPNQTPAPDQPFALST
VREESSIPRADSEKKWVYPSEQMFWNAMLKKGWKWKDEDISQKDMYNIIRIHNQNNEQ
AWKEILKWEALHAAECPCGPSLIRFGGKAKEYSPRARIRSWMGYELPFDRHDWIINRC
GTEVRYVIDYYDGGEVNKDYQFTILDVRPALDSLSAVWDRMKVAWWRWTS"
misc_feature 284..916
/gene="HCCS"
/gene_synonym="CCHL"
/note="Cyto_heme_lyase; Region: Cytochrome c/c1 heme
lyase"
/db_xref="CDD:pfam01265"
BASE COUNT 309 a 208 c 270 g 248 t
ORIGIN
1 ccgagtgaga ggaaggcggc ggcggcggcg gcggcggcgt gaagtcactg ctgctctggg
61 ttcgggttgg cgactgaagg cggtggaaat ttaaaattgt ttacagtcaa cactgtttcc
121 agccatgggt ttgtctccat ctgctcctgc tgttgcagtt caggcctcaa atgcttcagc
181 gtccccacct tcaggatgcc cgatgcatga agggaaaatg aaaggctgtc cagtgaatac
241 agagccatct ggcccaacct gtgagaagaa aacatactct gtgcctgccc accaggaacg
301 cgcctatgag tacgtggagt gtcccattag gggcactgcg gctgagaata aggagaacct
361 agatccttca aatctgatgc caccaccaaa tcaaacacca gctccagatc agccatttgc
421 attgtctact gtcagagaag agtcatccat tccgagagca gattcagaga aaaagtgggt
481 ttacccttct gagcagatgt tctggaatgc aatgttaaag aaagggtgga agtggaagga
541 tgaggatatc agtcagaagg atatgtataa tatcattaga attcacaatc agaataacga
601 gcaggcttgg aaggagattt tgaagtggga agcccttcat gctgcagagt gtccttgtgg
661 tccatcattg atccggtttg gagggaaagc aaaagagtat tcaccaaggg cacgaattcg
721 ttcctggatg gggtatgagt tgccttttga taggcacgat tggatcataa accgttgcgg
781 gacagaagtt agatatgtga ttgattatta tgatggtggt gaagtcaaca aggactacca
841 gttcaccatc ctggacgtcc gtcctgcctt agattcactt tcggcagtat gggacagaat
901 gaaagtcgct tggtggcgtt ggacctcgta aagcactgtt tcagatggaa aaatataaac
961 tatttttttc tgagcgatac attaaactat tttccccaga aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaa
//