LOCUS BC001642 3020 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cholinergic receptor, nicotinic, alpha 3, mRNA (cDNA
clone MGC:2112 IMAGE:2822768), complete cds.
ACCESSION BC001642
VERSION BC001642.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3020)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3020)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001642.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: h Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923121.
FEATURES Location/Qualifiers
source 1..3020
/db_xref="H-InvDB:HIT000030540"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2112 IMAGE:2822768"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3020
/gene="CHRNA3"
/db_xref="GeneID:1136"
/db_xref="HGNC:HGNC:1957"
/db_xref="MIM:118503"
CDS 187..1704
/gene="CHRNA3"
/codon_start=1
/product="cholinergic receptor, nicotinic, alpha 3"
/protein_id="AAH01642.1"
/db_xref="GeneID:1136"
/db_xref="HGNC:HGNC:1957"
/db_xref="MIM:118503"
/translation="MGSGPLSLPLALSPPRLLLLLLLSLLPVARASEAEHRLFERLFE
DYNEIIRPVANVSDPVIIHFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSD
YGGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCK
IDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEWAIIKAPGYKHD
IKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLC
ISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPT
THTMPSWVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCK
EGYPCQDGMCGYCHHRRIKISNFSANLTRSSSSESVDAVLSLSALSPEIKEAIQSVKY
IAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFTLVCILGTAGLFLQPLMAREDA"
BASE COUNT 760 a 770 c 692 g 798 t
ORIGIN
1 gtcctcccgc gggtccgagg gcgctggaaa cccagcggcg gcgaagcgga gaggagcccc
61 gcgcgtctcc gcccgcacgg ctccaggtct ggggtctgcg ctggagccgc gcggggagag
121 gccgtctctg cgaccgccgc gcccgctccc gaccgtccgg gtccgcggcc agcccggcca
181 ccagccatgg gctctggccc gctctcgctg cccctggcgc tgtcgccgcc gcggctgctg
241 ctgctgctgc tgctgtctct gctgccagtg gccagggcct cagaggctga gcaccgtcta
301 tttgagcggc tgtttgaaga ttacaatgag atcatccggc ctgtagccaa cgtgtctgac
361 ccagtcatca tccatttcga ggtgtccatg tctcagctgg tgaaggtgga tgaagtaaac
421 cagatcatgg agaccaacct gtggctcaag caaatctgga atgactacaa gctgaagtgg
481 aacccctctg actatggtgg ggcagagttc atgcgtgtcc ctgcacagaa gatctggaag
541 ccagacattg tgctgtataa caatgctgtt ggggatttcc aggtggacga caagaccaaa
601 gccttactca agtacactgg ggaggtgact tggatacctc cggccatctt taagagctcc
661 tgtaaaatcg acgtgaccta cttcccgttt gattaccaaa actgtaccat gaagttcggt
721 tcctggtcct acgataaggc gaaaatcgat ctggtcctga tcggctcttc catgaacctc
781 aaggactatt gggagagcgg cgagtgggcc atcatcaaag ccccaggcta caaacacgac
841 atcaagtaca actgctgcga ggagatctac cccgacatca catactcgct gtacatccgg
901 cgcctgccct tgttctacac catcaacctc atcatcccct gcctgctcat ctccttcctc
961 actgtgctcg tcttctacct gccctccgac tgcggtgaga aggtgaccct gtgcatttct
1021 gtcctcctct ccctgacggt gtttctcctg gtgatcactg agaccatccc ttccacctcg
1081 ctggtcatcc ccctgattgg agagtacctc ctgttcacca tgatttttgt aaccttgtcc
1141 atcgtcatca ccgtcttcgt gctcaacgtg cactacagaa ccccgacgac acacacaatg
1201 ccctcatggg tgaagactgt attcttgaac ctgctcccca gggtcatgtt catgaccagg
1261 ccaacaagca acgagggcaa cgctcagaag ccgaggcccc tctacggtgc cgagctctca
1321 aatctgaatt gcttcagccg cgcagagtcc aaaggctgca aggagggcta cccctgccag
1381 gacgggatgt gtggttactg ccaccaccgc aggataaaaa tctccaattt cagtgctaac
1441 ctcacgagaa gctctagttc tgaatctgtt gatgctgtgc tgtccctctc tgctttgtca
1501 ccagaaatca aagaagccat ccaaagtgtc aagtatattg ctgaaaatat gaaagcacaa
1561 aatgaagcca aagagattca agatgattgg aagtatgttg ccatggtgat tgatcgtatt
1621 tttctgtggg ttttcaccct ggtgtgcatt ctagggacag caggattgtt tctgcaaccc
1681 ctgatggcca gggaagatgc ataagcacta agctgtgtgc ctgcctggga gacttccttg
1741 tgtcagggca ggaggaggct gcttcctagt aagaacgtac tttctgttat caagctacca
1801 gctttgtttt tggcatttcg aggtttactt attttccact tatcttggaa tcatgcaaaa
1861 aaaaaaatgt caagagtatt tattaccgat aaatgaacat ttaactagcc tttttggtat
1921 ggtaaagaga tgtcaaaatg tgattctatg tgattagtat gctatgctat ggaatataca
1981 tgtaaaaatg tttcctttta gttgttgaaa caaaactgga tagaaaaatg ctgttcagaa
2041 atatgaaaag tcattcagtt atcactacag atctcccagt aatttttctt atttagccca
2101 taatctcttt gaaggtttat actaattcag caatccccca tcgttaccca tttcttacca
2161 tgcatttctc gttctttact gggtctaaag ggctatgcct ccatttcaga gagcttcaac
2221 tacttctctt gcatacttct aaattatact atgagaaatc atgcctagtt attcattgtt
2281 aatataactg tcttagtaca ccataaactg ggtggattat aaacaacaga aacttctcag
2341 ttttggaggt tgggaggtcc aaggtcaagg caccagcaaa tttggtgtct ggtgagggtc
2401 ctcttcctca aagggtgcct tctagctgtg tcctcacatg actgaaggga ctagctatct
2461 ctgtggggtc tattttataa gggcactaac cccattcatg agagcagagc ccccatggcc
2521 taatcacctt tccaaggccc caccttctat ctaagacaat cacgctggga ataggtttca
2581 acatatgaat tgggggagga cacatttgga ccacagcatg aacctttaga acagggtttc
2641 tcagccttag cactacggac attttgggct ggataaatat gtgttggtac agaatggggg
2701 tatcctgtgc attgtaggat ctttagcagt accctagcct caactcacta gatgccaatg
2761 acataccttg cttcttcacc agttatgata accaagaatg tctccattgt taaatgtccc
2821 cttaggagca aaattgcccc tggttgagaa acattgcttt agacaaattg ttaagagtat
2881 catgtactac acttctgaaa cttaacgtga tcatcaccac tgacagatga ttcacagaga
2941 gagactgttt gaatcttgtc tcactagttt ttcctgtgca aaaataaaat ggacagaatt
3001 gcaaaaaaaa aaaaaaaaaa
//