LOCUS BC001559 1211 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3-like,
mRNA (cDNA clone MGC:5124 IMAGE:3459327), complete cds.
ACCESSION BC001559
VERSION BC001559.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1211)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1211)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: i Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47078259.
FEATURES Location/Qualifiers
source 1..1211
/db_xref="H-InvDB:HIT000030491"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5124 IMAGE:3459327"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1211
/gene="BNIP3L"
/gene_synonym="BNIP3a"
/gene_synonym="NIX"
/db_xref="GeneID:665"
/db_xref="HGNC:HGNC:1085"
/db_xref="MIM:605368"
CDS 25..684
/gene="BNIP3L"
/gene_synonym="BNIP3a"
/gene_synonym="NIX"
/codon_start=1
/product="BCL2/adenovirus E1B 19kDa interacting protein
3-like"
/protein_id="AAH01559.1"
/db_xref="GeneID:665"
/db_xref="HGNC:HGNC:1085"
/db_xref="MIM:605368"
/translation="MSSHLVEPPPPLHNNNNNCEENEQSLPPPAGLNSSWVELPMNSS
NGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRGSSHCDSPSPQEDG
QIMFDVEMHTSRDHSSQSEEEVVEGEKEVEALKKSADWVSDWSSRPENIPPKEFHFRH
PKRSVSLSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVLALGLGIYIGKRLSTPSAST
Y"
BASE COUNT 360 a 277 c 259 g 315 t
ORIGIN
1 cgcagtcctg ccagctgtcc gacgatgtcg tcccacctag tcgagccgcc gccgcccctg
61 cacaacaaca acaacaactg cgaggaaaat gagcagtctc tgcccccgcc ggccggcctc
121 aacagttcct gggtggagct acccatgaac agcagcaatg gcaatgataa tggcaatggg
181 aaaaatgggg ggctggaaca cgtaccatcc tcatcctcca tccacaatgg agacatggag
241 aagattcttt tggatgcaca acatgaatca ggacagagta gttccagagg cagttctcac
301 tgtgacagcc cttcgccaca agaagatggg cagatcatgt ttgatgtgga aatgcacacc
361 agcagggacc atagctctca gtcagaagaa gaagttgtag aaggagagaa ggaagtcgag
421 gctttgaaga aaagtgcgga ctgggtatca gactggtcca gtagacccga aaacattcca
481 cccaaggagt tccacttcag acaccctaaa cgttctgtgt ctttaagcat gaggaaaagt
541 ggagccatga agaaaggggg tattttctcc gcagaatttc tgaaggtgtt cattccatct
601 ctcttccttt ctcatgtttt ggctttgggg ctaggcatct atattggaaa gcgactgagc
661 acaccctctg ccagcaccta ctgagggaaa ggaaaagccc ctggaaatgc gtgtgacctg
721 tgaagtggtg tattgtcaca gtagcttatt tgaacttgag accattgtaa gcatgaccca
781 acctaccacc ctgtttttac atatccaatt ccagtaactc tcaaattcaa tattttattc
841 aaactctgtt gaggcatttt actaacctta tacccttttt ggcctgaaga cattttagaa
901 tttcctaaca gagtttactg ttgtttagaa atttgcaagg gcttcttttc cgcaaatgcc
961 accagcagat tataattttg tcagcaatgc tattatctct aattagtgcc accagactag
1021 acctgtatca ttcatggtat aaattttact cttgcaacat aactaccatc tctctcttaa
1081 aacgagatca ggttagcaaa tgatgtaaaa gaagctttat tgtctagttg ttttttttcc
1141 cccaagacaa aggcaagttt ccctaagttt gagttgatag ttattaaaaa gaaaacaaaa
1201 aaaaaaaaaa a
//