LOCUS BC001554 1731 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens integrin-linked kinase, mRNA (cDNA clone MGC:5051
IMAGE:3457801), complete cds.
ACCESSION BC001554
VERSION BC001554.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1731)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1731)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: a Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62420872.
FEATURES Location/Qualifiers
source 1..1731
/db_xref="H-InvDB:HIT000030489"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5051 IMAGE:3457801"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1731
/gene="ILK"
/gene_synonym="P59"
/db_xref="GeneID:3611"
/db_xref="HGNC:HGNC:6040"
/db_xref="MIM:602366"
CDS 69..1427
/gene="ILK"
/gene_synonym="P59"
/codon_start=1
/product="integrin-linked kinase"
/protein_id="AAH01554.1"
/db_xref="GeneID:3611"
/db_xref="HGNC:HGNC:6040"
/db_xref="MIM:602366"
/translation="MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACRE
GRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNV
PLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN
RIPYKDTFWKGTTRTRPRNGTLNKHSGIDFKQLNFLTKLNENHSGELWKGRWQGNDIV
VKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS
LYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTAR
ISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF
ADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPILEKMQ
DK"
BASE COUNT 452 a 464 c 458 g 357 t
ORIGIN
1 ggatcctgca gcccgagtcc cgtcctcagg cttccccaat ccaggggact cggcgccggg
61 acgctgctat ggacgacatt ttcactcagt gccgggaggg caacgcagtc gccgttcgcc
121 tgtggctgga caacacggag aacgacctca accaggggga cgatcatggc ttctccccct
181 tgcactgggc ctgccgagag ggccgctctg ctgtggttga gatgttgatc atgcgggggg
241 cacggatcaa tgtaatgaac cgtggggatg acacccccct gcatctggca gccagtcatg
301 gacaccgtga tattgtacag aagctattgc agtacaaggc agacatcaat gcagtgaatg
361 aacatgggaa tgtgcccctg cactatgcct gtttttgggg ccaagatcaa gtggcagagg
421 acctggtggc aaatggggcc cttgtcagca tctgtaacaa gtatggagag atgcctgtgg
481 acaaagccaa ggcacccctg agagagcttc tccgagagcg ggcagagaag atgggccaga
541 atctcaaccg tattccatac aaggacacat tctggaaggg gaccacccgc actcggcccc
601 gaaatggaac cctgaacaaa cactctggca ttgacttcaa acagcttaac ttcctgacga
661 agctcaacga gaatcactct ggagagctat ggaagggccg ctggcagggc aatgacattg
721 tcgtgaaggt gctgaaggtt cgagactgga gtacaaggaa gagcagggac ttcaatgaag
781 agtgtccccg gctcaggatt ttctcgcatc caaatgtgct cccagtgcta ggtgcctgcc
841 agtctccacc tgctcctcat cctactctca tcacacactg gatgccatat ggatccctct
901 acaatgtact acatgaaggc accaatttcg tcgtggacca gagccaggct gtgaagtttg
961 ctttggacat ggcaaggggc atggccttcc tacacacact agagcccctc atcccacgac
1021 atgcactcaa tagccgtagt gtaatgattg atgaggacat gactgcccga attagcatgg
1081 ctgatgtcaa gttctctttc caatgtcctg gtcgcatgta tgcacctgcc tgggtagccc
1141 ccgaagctct gcagaagaag cctgaagaca caaacagacg ctcagcagac atgtggagtt
1201 ttgcagtgct tctgtgggaa ctggtgacac gggaggtacc ctttgctgac ctctccaata
1261 tggagattgg aatgaaggtg gcattggaag gccttcggcc taccatccca ccaggtattt
1321 cccctcatgt gtgtaagctc atgaagatct gcatgaatga agaccctgca aagcgaccca
1381 aatttgacat gattgtgcct atccttgaga agatgcagga caagtaggac tggaaggtcc
1441 ttgcctgaac tccagaggtg tcgggacatg gttgggggaa tgcacctccc caaagcagca
1501 ggcctctggt tgcctccccc gcctccagtc atggtactac cccagccatg gggtccatcc
1561 ccttccccca tccctaccac tgtggcccca agaggggcgg gctcagagct ttgtcacttg
1621 ccacatggtg tctcccaaca tgggagggat cagccccgcc tgtcacaata aagtttatta
1681 tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//