LOCUS BC001533 2166 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens F11 receptor, mRNA (cDNA clone MGC:651 IMAGE:2990019),
complete cds.
ACCESSION BC001533
VERSION BC001533.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2166)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2166)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC001533.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: o Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21464105.
FEATURES Location/Qualifiers
source 1..2166
/db_xref="H-InvDB:HIT000030478"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:651 IMAGE:2990019"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2166
/gene="F11R"
/gene_synonym="CD321"
/gene_synonym="JAM"
/gene_synonym="JAM-1"
/gene_synonym="JAM-A"
/gene_synonym="JAMA"
/gene_synonym="JCAM"
/gene_synonym="KAT"
/gene_synonym="PAM-1"
/db_xref="GeneID:50848"
/db_xref="HGNC:HGNC:14685"
/db_xref="MIM:605721"
CDS 45..944
/gene="F11R"
/gene_synonym="CD321"
/gene_synonym="JAM"
/gene_synonym="JAM-1"
/gene_synonym="JAM-A"
/gene_synonym="JAMA"
/gene_synonym="JCAM"
/gene_synonym="KAT"
/gene_synonym="PAM-1"
/codon_start=1
/product="F11 receptor"
/protein_id="AAH01533.1"
/db_xref="GeneID:50848"
/db_xref="HGNC:HGNC:14685"
/db_xref="MIM:605721"
/translation="MGTKAQVERKLLCLFILAILLCSLALGSVTVHSSEPEVRIPENN
PVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTRE
DTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSP
PSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGY
GTPMTSNAVRMEAVERNVGVIVAAVLVTLILLGILVFGIWFAYSRGHFDRTKKGTSSK
KVIYSQPSARSEGEFKQTSSFLV"
BASE COUNT 527 a 512 c 564 g 563 t
ORIGIN
1 cccaggagtc cttcggcggc tgttgtgtca gtggcctgat cgcgatgggg acaaaggcgc
61 aagtcgagag gaaactgttg tgcctcttca tattggcgat cctgttgtgc tccctggcat
121 tgggcagtgt tacagtgcac tcttctgaac ctgaagtcag aattcctgag aataatcctg
181 tgaagttgtc ctgtgcctac tcgggctttt cttctccccg tgtggagtgg aagtttgacc
241 aaggagacac caccagactc gtttgctata ataacaagat cacagcttcc tatgaggacc
301 gggtgacctt cttgccaact ggtatcacct tcaagtccgt gacacgggaa gacactggga
361 catacacttg tatggtctct gaggaaggcg gcaacagcta tggggaggtc aaggtcaagc
421 tcatcgtgct tgtgcctcca tccaagccta cagttaacat cccctcctct gccaccattg
481 ggaaccgggc agtgctgaca tgctcagaac aagatggttc cccaccttct gaatacacct
541 ggttcaaaga tgggatagtg atgcctacga atcccaaaag cacccgtgcc ttcagcaact
601 cttcctatgt cctgaatccc acaacaggag agctggtctt tgatcccctg tcagcctctg
661 atactggaga atacagctgt gaggcacgga atgggtatgg gacacccatg acttcaaatg
721 ctgtgcgcat ggaagctgtg gagcggaatg tgggggtcat cgtggcagcc gtccttgtaa
781 ccctgattct cctgggaatc ttggtttttg gcatctggtt tgcctatagc cgaggccact
841 ttgacagaac aaagaaaggg acttcgagta agaaggtgat ttacagccag cctagtgccc
901 gaagtgaagg agaattcaaa cagacctcgt cattcctggt gtgagcctgg tcggctcacc
961 gcctatcatc tgcatttgcc ttactcaggt gctaccggac tctggcccct gatgtctgta
1021 gtttcacagg atgccttatt tgtcttctac accccacagg gccccctact tcttcggatg
1081 tgtttttaat aatgtcagct atgtgcccca tcctccttca tgccctccct ccctttccta
1141 ccactgctga gtggcctgga acttgtttaa agtgtttatt ccccatttct ttgagggatc
1201 aggaaggaat cctgggtatg ccattgactt cccttctaag tagacagcaa aaatggcggg
1261 ggtcgcagga atctgcactc aactgcccac ctggctggca gggatctttg aataggtatc
1321 ttgagcttgg ttctgggctc tttccttgtg tactgacgac cagggccagc tgttctagag
1381 cgggaattag aggctagagc ggctgaaatg gttgtttggt gatgacactg gggtccttcc
1441 atctctgggg cccactctct tctgtcttcc catgggaagt gccactggga tccctctgcc
1501 ctgtcctcct gaatacaagc tgactgacat tgactgtgtc tgtggaaaat gggagctctt
1561 gttgtggaga gcatagtaaa ttttcagaga acttgaagcc aaaaggattt aaaaccgctg
1621 ctctaaagaa aagaaaactg gaggctgggc gcagtggctc acgcctataa tcccagaggc
1681 tgaggcaggc ggatcacctg aggtcaggag ttcgagatca gcctgaccaa catggagaaa
1741 ccctactgga aatacaaagt tagccaggca tggtggtgca tgcctgtagt cccagctgct
1801 caggagcctg gcaacaagag caaaactcca gctcaaaaaa aaaaaagaaa gaaaagaaag
1861 ctggagctgg tggcttaggc catcaccctt cccttggctg gaactactgg acagaccctt
1921 ttgagatgtg cctgtggtgc tgtggagatg tgtgtagtgg tcttagctct ttgttgagct
1981 tgtgtgtgtg ttgtgtagtc ttagctgtat gctgaaattg ggcgtgtgtt ggagggcttc
2041 ttagctcttt ggtgagattg tatttctatg tgtttgtatc agctgaatgt tgctggaaat
2101 aaaaccttgg tttgtcaagg ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaa
//