LOCUS BC001492 1914 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ciliary neurotrophic factor receptor, mRNA (cDNA clone
MGC:1774 IMAGE:3510004), complete cds.
ACCESSION BC001492
VERSION BC001492.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1914)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1914)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC001492.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: d Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22212916.
FEATURES Location/Qualifiers
source 1..1914
/db_xref="H-InvDB:HIT000030449"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1774 IMAGE:3510004"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1914
/gene="CNTFR"
/gene_synonym="MGC1774"
/db_xref="GeneID:1271"
/db_xref="HGNC:HGNC:2170"
/db_xref="MIM:118946"
CDS 141..1259
/gene="CNTFR"
/gene_synonym="MGC1774"
/codon_start=1
/product="ciliary neurotrophic factor receptor"
/protein_id="AAH01492.1"
/db_xref="GeneID:1271"
/db_xref="HGNC:HGNC:2170"
/db_xref="MIM:118946"
/translation="MAAPVPWACCAVLAAAAAVVYAQRHSPQEAPHVQYERLGSDVTL
PCGTANWDAAVTWRVNGTDLAPDLLNGSQLVLHGLELGHSGLYACFHRDSWHLRHQVL
LHVGLPPREPVLSCRSNTYPKGFYCSWHLPTPTYIPNTFNVTVLHGSKIMVCEKDPAL
KNRCHIRYMHLFSTIKYKVSISVSNALGHNATAITFDEFTIVKPDPPENVVARPVPSN
PRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSDGTAHTITDAYAGKEY
IIQVAAKDNEIGTWSDWSVAAHATPWTEEPRHLTTEAQAAETTTSTTSSLAPPPTTKI
CDPGELGSGGGPSAPFLVSVPITLALAAAAATASSLLI"
BASE COUNT 359 a 667 c 519 g 369 t
ORIGIN
1 gaggcggcgg ctccagccgg cgcggcgcga ggctcggcgg tgggatccgg cgggcggtgc
61 tagctccgcg ctccctgcct cgctcgctgc cgggggcggt cggaaggcgc ggcgcgaagc
121 ccgggtggcc cgagggcgcg atggctgctc ctgtcccgtg ggcctgctgt gctgtgcttg
181 ccgccgccgc cgcagttgtc tacgcccaga gacacagtcc acaggaggca ccccatgtgc
241 agtacgagcg cctgggctct gacgtgacac tgccatgtgg gacagcaaac tgggatgctg
301 cggtgacgtg gcgggtaaat gggacagacc tggcccctga cctgctcaac ggctctcagc
361 tggtgctcca tggcctggaa ctgggccaca gtggcctcta cgcctgcttc caccgtgact
421 cctggcacct gcgccaccaa gtcctgctgc atgtgggctt gccgccgcgg gagcctgtgc
481 tcagctgccg ctccaacact taccccaagg gcttctactg cagctggcat ctgcccaccc
541 ccacctacat tcccaacacc ttcaatgtga ctgtgctgca tggctccaaa attatggtct
601 gtgagaagga cccagccctc aagaaccgct gccacattcg ctacatgcac ctgttctcca
661 ccatcaagta caaggtctcc ataagtgtca gcaatgccct gggccacaat gccacagcta
721 tcacctttga cgagttcacc attgtgaagc ctgatcctcc agaaaatgtg gtagcccggc
781 cagtgcccag caaccctcgc cggctggagg tgacgtggca gaccccctcg acctggcctg
841 accctgagtc ttttcctctc aagttctttc tgcgctaccg acccctcatc ctggaccagt
901 ggcagcatgt ggagctgtcc gacggcacag cacacaccat cacagatgcc tacgccggga
961 aggagtacat tatccaggtg gcagccaagg acaatgagat tgggacatgg agtgactgga
1021 gcgtagccgc ccacgctacg ccctggactg aggaaccgcg acacctcacc acggaggccc
1081 aggctgcgga gaccacgacc agcaccacca gctccctggc acccccacct accacgaaga
1141 tctgtgaccc tggggagctg ggcagcggcg ggggaccctc ggcacccttc ttggtcagcg
1201 tccccatcac tctggccctg gctgccgctg ccgccactgc cagcagtctc ttgatctgag
1261 cccggcaccc catgaggaca tgcagagcac ctgcagagga gcaggaggcc ggagctgagc
1321 ctgcagaccc cggtttctat tttgcacacg ggcaggagga ccttttgcat tctcttcaga
1381 cacaatttgt ggagaccccg gcgggcccgg gcctgccgcc ccccagccct gccgcaccaa
1441 gctggccctc cttcctccct caggggaggt gggccatgca gctaacccac ccaccaaaga
1501 ccccctcacc ctggcccctt gggctggacc ctccaatgcc agcgactccc aggagccctt
1561 gggggacgtg aggggagcct ctcacatccg atttctcctc ctgccccagc ctcctgtcta
1621 tcccagggtc tctgttgcca ccatcagatt ataagctcct gatgctgggg gggcccagcc
1681 atccccctcc ccccagcacc cacaattttc agtcccctcc cctctgccct gttttgtata
1741 cccctcccct gaccctgctc ctatcccaca gtatttaatg ccctgtcagt cccttctagt
1801 ctgactcaat ggtaacttgc tgtatttgaa ttttttatag atgtatatac agggtggggg
1861 gagtgggcgg ttctcattaa acgtcaccat ttcatgaaaa aaaaaaaaaa aaaa
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