LOCUS BC001463 1824 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens shisa homolog 5 (Xenopus laevis), mRNA (cDNA clone
MGC:880 IMAGE:3138644), complete cds.
ACCESSION BC001463
VERSION BC001463.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1824)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1824)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC001463.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: j Column: 5.
FEATURES Location/Qualifiers
source 1..1824
/db_xref="H-InvDB:HIT000030432"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:880 IMAGE:3138644"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1824
/gene="SHISA5"
/gene_synonym="hShisa5"
/gene_synonym="SCOTIN"
/db_xref="GeneID:51246"
/db_xref="HGNC:HGNC:30376"
/db_xref="MIM:607290"
CDS 135..548
/gene="SHISA5"
/gene_synonym="hShisa5"
/gene_synonym="SCOTIN"
/codon_start=1
/product="SHISA5 protein"
/protein_id="AAH01463.2"
/db_xref="GeneID:51246"
/db_xref="HGNC:HGNC:30376"
/db_xref="MIM:607290"
/translation="MGFGATLAVGLTIFVLSVVTIIICFTCSCCCLYKTCRRPRPVVT
TTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMG
PPAYHETLAGGAAAPYPASQPPYNPAYMDAPKAAL"
BASE COUNT 373 a 536 c 488 g 427 t
ORIGIN
1 gtggctgacg tcatctggag gagatttgct ttctttttct ccaaaagggg aggaaattga
61 aactgagtgg cccacgatgg gaagagggga agcccagggg tacaggaggc ctctgggtga
121 aggcagaggc taacatgggg ttcggagcga ccttggccgt tggcctgacc atctttgtgc
181 tgtctgtcgt cactatcatc atctgcttca cctgctcctg ctgctgcctt tacaagacgt
241 gccgccgacc acgtccggtt gtcaccacca ccacatccac cactgtggtg catgcccctt
301 atcctcagcc tccaagtgtg ccgcccagct accctggacc aagctaccag ggctaccaca
361 ccatgccgcc tcagccaggg atgccagcag caccctaccc aatgcagtac ccaccacctt
421 acccagccca gcccatgggc ccaccggcct accacgagac cctggctgga ggagcagccg
481 cgccctaccc cgccagccag cctccttaca acccggccta catggatgcc ccgaaggcgg
541 ccctctgagc attccctggc ctctctggct gccacttggt tatgttgtgt gtgtgcgtga
601 gtggtgtgca ggtgcggttc cttacgcccc atgtgtgctg tgtgtgtcca ggcacggttc
661 cttacgcccc atgtgtgctg tgtgtgtcct gcctgtatat gtggcttcct ctgatgctga
721 caaggtgggg aacaatcctt gccagagtgg gctgggacca gactttgttc tcttcctcac
781 ctgaaattat gcttcctaaa atctcaagcc aaactcaaag aatggggtgg tggggggcac
841 cctgtgaggt ggcccctgag aggtgggggc ctctccaggg cacatctgga gttcttctcc
901 agcttaccct agggtgacca agtagggcct gtcacaccag ggtggcgcag ctttctgtgt
961 gatgcagatg tgtcctggtt tcggcagcgt agccagctgc tgcttgaggc catggctcgt
1021 ccccggagtt gggggtaccc gttgcagagc cagggacatg atgcaggcga agcttgggat
1081 ctggccaagt tggactttga tcctttgggc agatgtccca ttgctccctg gagcctgtca
1141 tgcctgttgg ggatcaggca gcctcctgat gccagaacac ctcaggcaga gccctactca
1201 gctgtacctg tctgcctgga ctgtcccctg tccccgcatc tcccctggga ccagctggcg
1261 ggccacatgc acacacagcc tagctgcccc cagggagctc tgctgccctt gctggccctg
1321 cccttcccac aggtgagcag ggctcctgtc caccagcaca ctcagttctc ttccctgcag
1381 tgttttcatt ttattttagc caaacatttt gcctgttttc tgtttcaaac atgatagttg
1441 atatgagact gaaacccctg ggttgtggag ggaaattggc tcagagatgg acaacctggc
1501 aactgtgagt ccctgcttcc cgacaccagc ctcatggaat atgcaacaac tcctgtaccc
1561 cagtccacgg tgttctggca gcagggacac ctgggccaat gggccatctg gaccaaaggt
1621 ggggtgtggg gccctggatg gcagctctgg cccagacatg aatacctcgt gttcctcctc
1681 cctctattac tgtttcacca gagctgtctt agctcaaatc tgttgtgttt ctgagtctag
1741 ggtctgtaca cttgtttata ataaatgcaa tcgtttggaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaa
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