LOCUS BC001460 3906 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens La ribonucleoprotein domain family, member 1, mRNA
(cDNA clone MGC:2954 IMAGE:3138935), complete cds.
ACCESSION BC001460
VERSION BC001460.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3906)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3906)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC001460.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: h Column: 21.
FEATURES Location/Qualifiers
source 1..3906
/db_xref="H-InvDB:HIT000030430"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2954 IMAGE:3138935"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3906
/gene="LARP1"
/gene_synonym="KIAA0731"
/gene_synonym="LARP"
/gene_synonym="MGC19556"
/db_xref="GeneID:23367"
/db_xref="HGNC:HGNC:29531"
CDS 25..3084
/gene="LARP1"
/gene_synonym="KIAA0731"
/gene_synonym="LARP"
/gene_synonym="MGC19556"
/codon_start=1
/product="La ribonucleoprotein domain family, member 1"
/protein_id="AAH01460.2"
/db_xref="GeneID:23367"
/db_xref="HGNC:HGNC:29531"
/translation="MLWRVLLSKRPPFPHPELDFQEAPIPSCPGRLPGRKNSVALAAA
PRKEPTGDREKPLPFPVLAPFSNPEHSAPAKVVRAAVPKQRKGSKVGDFGDAINWPTP
GEIAHKSVQPQSHKPQPTRKLPPKKDMKEQEKGEGSDSKESPKTKSDESGEEKNGDED
CQRGGQKKKGNKHKWVPLQIDMKPEVPREKLASRPTRPPEPRHIPANRGEIKGSESAT
YVPVAPPTPAWQPEIKPEPAWHDQDETSSVKSDGAGGARASFRGRGRGRGRGRGRGRG
GTRTHFDYQFGYRKFDGVEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQI
EYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEI
VDEKVRRREEPEKWPLPPIVDYSQTDFSQLLNCPEFVPRQHYQKETESAPGSPRAVTP
VPTKTEEVSNLKTLPKGLSASLPDLDSENWIEVKKRPRPSPARPKKSEESRFSHLTSL
PQQLPSQQLMSKDQDEQEELDFLFDEEMEQMDGRKNTFTAWSDEESDYEIDDRDVNKI
LIVTQTPHYMRRHPGGDRTGNHTSRAKMSAELAKVINDGLFYYEQDLWAEKFEPEYSQ
IKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPE
PSTIARSLPTTVPESPNYRNTRTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRK
RKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPTVGSYGCTPQSLPKFQHP
SHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYE
EFKQLALEDAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLE
KFWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHSVVAGGGGGE
GRKRCPSQSSSRPAAMISQPPTPPTGQPVREDAKWTSQHSNTQTLGK"
BASE COUNT 1037 a 1091 c 999 g 779 t
ORIGIN
1 gtgaccccag gccctggtca ctccatgctt tggagggtgc ttttgtcaaa gaggcctcct
61 ttccctcacc cagagctgga tttccaagag gctcccatac ctagctgccc tggcagactc
121 ccagggagga aaaacagcgt ggccttggca gctgccccga ggaaggagcc cacaggtgac
181 agggagaagc cattgccatt ccctgtcctg gcccccttca gcaaccctga acactctgct
241 ccagccaagg tggtgagggc agctgttcct aaacagcgca aaggcagcaa ggttggtgac
301 tttggagatg caatcaattg gcccacacct ggagagatag cccacaagag tgttcagcca
361 cagtcccaca agcctcagcc tacccgtaaa ctgccaccca agaaggacat gaaggaacag
421 gagaaaggag aagggagtga tagtaaggag agtccaaaaa ccaaatcaga tgaatcaggg
481 gaggaaaaga atggagatga ggattgccag cgaggcgggc agaagaagaa aggaaacaaa
541 cacaagtggg ttccattaca aatagacatg aagcctgaag tgcccagaga gaaactggct
601 tcacgcccca ctcgcccacc ggagcctaga cacatacctg ccaatcgcgg agagatcaaa
661 gggtctgagt ctgccaccta cgtgcccgtg gcccccccca ccccagcctg gcaaccagag
721 atcaaaccgg agcctgcctg gcacgaccag gatgagacat cgagtgtgaa gagtgatggg
781 gctggtgggg cgcgggcttc cttccgtggc cgtggacggg ggcgtggtcg cggccgggga
841 cgcggccggg gtggcactcg aacccatttt gactaccagt ttggctaccg aaagtttgat
901 ggtgtggagg ggcctcgtac gcccaagtac atgaacaaca tcacctacta ctttgacaat
961 gtcagcagca ccgagcttta cagtgtggat caggaactgc tcaaagacta catcaagcgc
1021 cagattgaat actacttcag cgtggacaat ttagagcgag acttcttcct gcgaaggaaa
1081 atggatgctg atggtttcct acccatcacc cttattgctt ccttccaccg agtgcaggcc
1141 cttaccactg acatttcact catctttgcg gccctaaagg acagcaaggt ggtggagatc
1201 gttgatgaga aagttcgtag gagggaggaa ccagaaaagt ggcctcttcc cccaatagtg
1261 gattattcac agactgattt ctcccagctt ctcaactgcc ctgaatttgt tccccgtcag
1321 cactaccaaa aggagacaga gtcggcacct ggctctcctc gtgcagtcac cccagtgcca
1381 accaaaacag aggaggtcag caacctaaag acactaccca agggcctgtc tgccagcctg
1441 cctgacctgg attctgagaa ctggattgaa gtgaagaaga ggcctcggcc atccccagca
1501 cggcccaaga agtcagagga gtccagattt tcccacctga cctccctgcc tcagcagctg
1561 ccttcccagc agctgatgtc caaggatcag gatgagcaag aggaactgga ttttctgttt
1621 gacgaggaga tggagcagat ggatgggcgg aagaacacct tcactgcctg gtctgatgag
1681 gaatctgact atgagattga tgacagggat gtcaacaaga tcctcattgt cacccagaca
1741 ccacattaca tgcgccggca cccagggggg gaccgcacag gcaaccacac ctcgcgtgcc
1801 aagatgagcg ccgaactggc caaggtcatt aatgatggcc tcttctacta tgagcaggac
1861 ctgtgggctg aaaagtttga acctgagtat tcccagatca agcaagaagt cgagaacttc
1921 aaaaaggtca atatgatcag ccgggagcag tttgacacac tgacccctga gccccctgtg
1981 gatcccaacc aggaagttcc tcctgggcca cctcggttcc agcaagttcc tacggatgcc
2041 ctggccaaca agttgtttgg tgctcctgag ccctccacca tcgcccgctc tctaccaacc
2101 actgtcccag agtcaccaaa ctaccgcaac accaggaccc ctcgcactcc ccggacacca
2161 cagctcaaag actcaagcca gacatcacgg ttttacccag tggtgaaaga aggacggaca
2221 ctggatgcca agatgcctcg aaaaagaaag acaagacaca gttcaaaccc acccttggag
2281 agccatgtgg gctgggtgat ggattcccgt gagcacaggc cccgtactgc ttccatcagc
2341 tccagcccct cagaagggac gcctacagtt ggcagctatg gctgtacccc tcagtcattg
2401 cccaagttcc agcatccttc ccatgaactg ctcaaggaaa atggcttcac acaacacgtc
2461 taccataagt atcgtaggcg ctgccttaat gagcggaaac gcttgggcat tggccagtct
2521 caggagatga acacactctt ccgcttctgg tccttcttcc tccgagatca cttcaacaaa
2581 aagatgtatg aggagttcaa gcagctggct ctggaggacg ccaaagaagg ctacagatat
2641 ggtttggagt gcctttttcg atactacagt tatggcctgg aaaagaagtt ccggctggac
2701 atattcaagg attttcagga ggaaacggtg aaggactatg aagctggcca actgtatggg
2761 ctggagaagt tctgggcctt cttgaaatat tccaaagcca aaaatttgga cattgacccc
2821 aaactgcaag aatacctcgg caaattccga cgtcttgaag acttccgagt agatcccccc
2881 atgggtgagg agggcaacca caagcgacac tcagtggtag caggaggtgg cggcggtgag
2941 ggcaggaagc ggtgcccctc ccagtcttcc agcaggcctg ctgccatgat cagccaaccc
3001 cctacaccac ccaccggcca gcctgtccgg gaagatgcca aatggacaag ccagcactcg
3061 aacacacaga ctttgggaaa gtgaaaagct ccttagccct ggggcttgag gggggaaagg
3121 ggtagggtgg gtaagagtcc atgggggtgc ccagtcccag gagaggggac aatgaaggga
3181 caggcctgga gttactagga caggcctttg tgctgagtag caatgtatac accatttggg
3241 ctatcagagg tacccctggg caggagcctc tacatcccct tccccctcct ctctccatga
3301 ctcttgacat cctagcttct tctaaggggg gagggaaagg ggggagattt ttatatatat
3361 atacatatat atatatcaag ttttaaatta ttgatagttc atctggatta ccaaaatcac
3421 tctgcagccc tgcccgaggc tagtaggctg caaccctggt ccccacccct aacctcctgc
3481 tccccctcaa gccaactatg cagcccacaa gaaggccctg cgggcccccc cattgcccag
3541 cactgtctca tagaaggctc tggtggtacc tctgggcccc aggagcatca gccccttgat
3601 catctggggt ttgtcatcac catattttct ccctgctgtt cccaccatgc ccttctgcca
3661 tcttctggga gaaggaaacc aaaggatcta aaactggggt ttgggggaag gtttcagcct
3721 ctccccactc cccttgcccc acacccttta ctccccagcc cagagagacg ctgcttttac
3781 caggaaagac tattgaaaga tgttttattt tatttttctc tgacctttcc atccttgaaa
3841 aaatggggaa aaaagaagaa aaaagacaaa atcgaccata aaagaccaaa aaaaaaaaaa
3901 aaaaaa
//